RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 KRTAP2-2Q9BYT5 123 aa6.95□□□□□ -1.3
PRPF40B-216ENST00000552301 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
PRPF40B-216ENST00000552301 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
PRPF40B-216ENST00000552301 KRTAP4-11Q9BYQ6 195 aa6.92□□□□□ -1.3
PRPF40B-216ENST00000552301 KRTAP19-7Q3SYF9 63 aa6.9□□□□□ -1.3
PRPF40B-216ENST00000552301 K7ERS5 55 aa6.89□□□□□ -1.31
PRPF40B-216ENST00000552301 MT1EP04732 61 aa6.85□□□□□ -1.31
PRPF40B-216ENST00000552301 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
PRPF40B-216ENST00000552301 A6NED7 52 aa6.79□□□□□ -1.32
PRPF40B-216ENST00000552301 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-216ENST00000552301 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
PRPF40B-216ENST00000552301 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
PRPF40B-216ENST00000552301 KRTAP19-3Q7Z4W3 81 aa6.77□□□□□ -1.33
PRPF40B-216ENST00000552301 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
PRPF40B-216ENST00000552301 KRTAP25-1Q3LHN0 102 aa6.66□□□□□ -1.34
PRPF40B-216ENST00000552301 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
PRPF40B-216ENST00000552301 MT1GP13640 62 aa6.63□□□□□ -1.35
PRPF40B-216ENST00000552301 MT1LQ93083 61 aa6.59□□□□□ -1.35
PRPF40B-216ENST00000552301 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
PRPF40B-216ENST00000552301 MT1MQ8N339 61 aa6.52□□□□□ -1.37
PRPF40B-216ENST00000552301 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
PRPF40B-216ENST00000552301 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
PRPF40B-216ENST00000552301 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
PRPF40B-216ENST00000552301 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
PRPF40B-216ENST00000552301 ROMO1P60602 79 aa6.39□□□□□ -1.39
PRPF40B-216ENST00000552301 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
PRPF40B-216ENST00000552301 KRTAP4-3Q9BYR4 195 aa6.33□□□□□ -1.4
PRPF40B-216ENST00000552301 H3BS24 57 aa6.25□□□□□ -1.41
PRPF40B-216ENST00000552301 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
PRPF40B-216ENST00000552301 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
PRPF40B-216ENST00000552301 MT4P47944 62 aa6.08□□□□□ -1.44
PRPF40B-216ENST00000552301 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
PRPF40B-216ENST00000552301 KRTAP5-4Q6L8H1 288 aa6.05□□□□□ -1.44
PRPF40B-216ENST00000552301 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
PRPF40B-216ENST00000552301 AHNAK2Q8IVF2 5795 aa6.02□□□□□ -1.45
PRPF40B-216ENST00000552301 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
PRPF40B-216ENST00000552301 PRO0628Q9UI54 55 aa5.9□□□□□ -1.46
PRPF40B-216ENST00000552301 KRTAP5-10Q6L8G5 202 aa5.87□□□□□ -1.47
PRPF40B-216ENST00000552301 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
PRPF40B-216ENST00000552301 SPRR5A0A1B0GTR4 108 aa5.73□□□□□ -1.49
PRPF40B-216ENST00000552301 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
PRPF40B-216ENST00000552301 PMAIP1Q13794 54 aa5.7□□□□□ -1.5
PRPF40B-216ENST00000552301 KRTAP5-7Q6L8G8 165 aa5.67□□□□□ -1.5
PRPF40B-216ENST00000552301 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
PRPF40B-216ENST00000552301 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
PRPF40B-216ENST00000552301 MT1AP04731 61 aa5.63□□□□□ -1.51
PRPF40B-216ENST00000552301 SVIPQ8NHG7 77 aa5.63□□□□□ -1.51
PRPF40B-216ENST00000552301 KRTAP6-1Q3LI64 71 aa5.56□□□□□ -1.52
PRPF40B-216ENST00000552301 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
PRPF40B-216ENST00000552301 PRAC1Q96KF2 57 aa5.43□□□□□ -1.54
PRPF40B-216ENST00000552301 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
PRPF40B-216ENST00000552301 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
PRPF40B-216ENST00000552301 MT3P25713 68 aa5.15□□□□□ -1.59
PRPF40B-216ENST00000552301 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
PRPF40B-216ENST00000552301 AHNAKQ09666 5890 aaKnown RBP5.01□□□□□ -1.61
PRPF40B-216ENST00000552301 MUC5BQ9HC84 5762 aaPredicted RBP4.98□□□□□ -1.61
PRPF40B-216ENST00000552301 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
PRPF40B-216ENST00000552301 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
PRPF40B-216ENST00000552301 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
PRPF40B-216ENST00000552301 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
PRPF40B-216ENST00000552301 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
PRPF40B-216ENST00000552301 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
PRPF40B-216ENST00000552301 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
PRPF40B-216ENST00000552301 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
PRPF40B-216ENST00000552301 LCE1BQ5T7P3 118 aa4.4□□□□□ -1.71
PRPF40B-216ENST00000552301 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
PRPF40B-216ENST00000552301 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
PRPF40B-216ENST00000552301 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
PRPF40B-216ENST00000552301 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
PRPF40B-216ENST00000552301 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
PRPF40B-216ENST00000552301 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
PRPF40B-216ENST00000552301 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
PRPF40B-216ENST00000552301 INE1O15225 51 aa3.52□□□□□ -1.85
PRPF40B-216ENST00000552301 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
PRPF40B-216ENST00000552301 PRM1P04553 51 aa3.28□□□□□ -1.88
PRPF40B-216ENST00000552301 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
PRPF40B-216ENST00000552301 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
PRPF40B-216ENST00000552301 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 65.3 ms