RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
PTCH1-225ENST00000551845 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
PTCH1-225ENST00000551845 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
PTCH1-225ENST00000551845 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
PTCH1-225ENST00000551845 A8MU10 97 aa4.22□□□□□ -1.73
PTCH1-225ENST00000551845 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
PTCH1-225ENST00000551845 PRAC1Q96KF2 57 aa4.22□□□□□ -1.73
PTCH1-225ENST00000551845 UQCR11O14957 56 aa4.2□□□□□ -1.74
PTCH1-225ENST00000551845 Q1T7F1 81 aa4.15□□□□□ -1.75
PTCH1-225ENST00000551845 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
PTCH1-225ENST00000551845 PSPHP1O15172 72 aa4.12□□□□□ -1.75
PTCH1-225ENST00000551845 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
PTCH1-225ENST00000551845 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
PTCH1-225ENST00000551845 K7ERS5 55 aa4.05□□□□□ -1.76
PTCH1-225ENST00000551845 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
PTCH1-225ENST00000551845 TNP1P09430 55 aa4.04□□□□□ -1.76
PTCH1-225ENST00000551845 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
PTCH1-225ENST00000551845 A6NED7 52 aa4□□□□□ -1.77
PTCH1-225ENST00000551845 KRTAP19-7Q3SYF9 63 aa3.96□□□□□ -1.78
PTCH1-225ENST00000551845 DSTQ03001 7570 aaKnown RBP3.93□□□□□ -1.78
PTCH1-225ENST00000551845 MT1EP04732 61 aa3.92□□□□□ -1.78
PTCH1-225ENST00000551845 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
PTCH1-225ENST00000551845 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
PTCH1-225ENST00000551845 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
PTCH1-225ENST00000551845 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
PTCH1-225ENST00000551845 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
PTCH1-225ENST00000551845 MT1GP13640 62 aa3.83□□□□□ -1.8
PTCH1-225ENST00000551845 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
PTCH1-225ENST00000551845 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
PTCH1-225ENST00000551845 MT3P25713 68 aa3.79□□□□□ -1.8
PTCH1-225ENST00000551845 KRTAP12-3P60328 96 aa3.78□□□□□ -1.8
PTCH1-225ENST00000551845 MT1LQ93083 61 aa3.78□□□□□ -1.8
PTCH1-225ENST00000551845 MT4P47944 62 aa3.76□□□□□ -1.81
PTCH1-225ENST00000551845 ROMO1P60602 79 aa3.76□□□□□ -1.81
PTCH1-225ENST00000551845 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
PTCH1-225ENST00000551845 KRTAP5-10Q6L8G5 202 aa3.74□□□□□ -1.81
PTCH1-225ENST00000551845 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
PTCH1-225ENST00000551845 MT1MQ8N339 61 aa3.72□□□□□ -1.81
PTCH1-225ENST00000551845 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
PTCH1-225ENST00000551845 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
PTCH1-225ENST00000551845 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
PTCH1-225ENST00000551845 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
PTCH1-225ENST00000551845 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
PTCH1-225ENST00000551845 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
PTCH1-225ENST00000551845 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
PTCH1-225ENST00000551845 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
PTCH1-225ENST00000551845 KTN1-AS1Q86SY8 53 aa3.55□□□□□ -1.84
PTCH1-225ENST00000551845 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
PTCH1-225ENST00000551845 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
PTCH1-225ENST00000551845 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
PTCH1-225ENST00000551845 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
PTCH1-225ENST00000551845 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
PTCH1-225ENST00000551845 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
PTCH1-225ENST00000551845 SYNE1Q8NF91 8797 aaKnown RBP3.28□□□□□ -1.88
PTCH1-225ENST00000551845 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
PTCH1-225ENST00000551845 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
PTCH1-225ENST00000551845 MT1AP04731 61 aa3.23□□□□□ -1.89
PTCH1-225ENST00000551845 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
PTCH1-225ENST00000551845 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
PTCH1-225ENST00000551845 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
PTCH1-225ENST00000551845 MUC5ACP98088 5654 aa3.13□□□□□ -1.91
PTCH1-225ENST00000551845 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
PTCH1-225ENST00000551845 MUC5BQ9HC84 5762 aaPredicted RBP3.08□□□□□ -1.92
PTCH1-225ENST00000551845 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
PTCH1-225ENST00000551845 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
PTCH1-225ENST00000551845 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
PTCH1-225ENST00000551845 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
PTCH1-225ENST00000551845 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
PTCH1-225ENST00000551845 INE1O15225 51 aa2.6□□□□□ -1.99
PTCH1-225ENST00000551845 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
PTCH1-225ENST00000551845 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
PTCH1-225ENST00000551845 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
PTCH1-225ENST00000551845 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
PTCH1-225ENST00000551845 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
PTCH1-225ENST00000551845 PRM1P04553 51 aa1.91□□□□□ -2.1
PTCH1-225ENST00000551845 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
PTCH1-225ENST00000551845 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
PTCH1-225ENST00000551845 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 34.9 ms