RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
NEK3-203ENST00000551355 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.76
NEK3-203ENST00000551355 PP632Q6XCG6 107 aa4.05□□□□□ -1.76
NEK3-203ENST00000551355 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
NEK3-203ENST00000551355 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
NEK3-203ENST00000551355 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
NEK3-203ENST00000551355 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
NEK3-203ENST00000551355 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
NEK3-203ENST00000551355 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
NEK3-203ENST00000551355 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
NEK3-203ENST00000551355 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
NEK3-203ENST00000551355 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
NEK3-203ENST00000551355 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
NEK3-203ENST00000551355 KMT2DO14686 5537 aa3.82□□□□□ -1.8
NEK3-203ENST00000551355 MT1EP04732 61 aa3.81□□□□□ -1.8
NEK3-203ENST00000551355 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
NEK3-203ENST00000551355 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
NEK3-203ENST00000551355 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
NEK3-203ENST00000551355 MT1LQ93083 61 aa3.71□□□□□ -1.82
NEK3-203ENST00000551355 MT1GP13640 62 aa3.69□□□□□ -1.82
NEK3-203ENST00000551355 SPRR2EP22531 72 aa3.69□□□□□ -1.82
NEK3-203ENST00000551355 SPRR2BP35325 72 aa3.69□□□□□ -1.82
NEK3-203ENST00000551355 SPRR2AP35326 72 aa3.69□□□□□ -1.82
NEK3-203ENST00000551355 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
NEK3-203ENST00000551355 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
NEK3-203ENST00000551355 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
NEK3-203ENST00000551355 MT1MQ8N339 61 aa3.59□□□□□ -1.83
NEK3-203ENST00000551355 SPRR2DP22532 72 aa3.56□□□□□ -1.84
NEK3-203ENST00000551355 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
NEK3-203ENST00000551355 MT3P25713 68 aa3.53□□□□□ -1.84
NEK3-203ENST00000551355 NEBP20929 6669 aa3.51□□□□□ -1.85
NEK3-203ENST00000551355 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
NEK3-203ENST00000551355 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
NEK3-203ENST00000551355 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
NEK3-203ENST00000551355 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
NEK3-203ENST00000551355 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
NEK3-203ENST00000551355 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
NEK3-203ENST00000551355 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
NEK3-203ENST00000551355 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
NEK3-203ENST00000551355 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
NEK3-203ENST00000551355 LUZP6Q538Z0 58 aa3.34□□□□□ -1.87
NEK3-203ENST00000551355 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
NEK3-203ENST00000551355 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
NEK3-203ENST00000551355 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
NEK3-203ENST00000551355 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
NEK3-203ENST00000551355 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
NEK3-203ENST00000551355 MT1AP04731 61 aa3.18□□□□□ -1.9
NEK3-203ENST00000551355 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
NEK3-203ENST00000551355 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
NEK3-203ENST00000551355 MT4P47944 62 aa3.06□□□□□ -1.92
NEK3-203ENST00000551355 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
NEK3-203ENST00000551355 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
NEK3-203ENST00000551355 KRTAP5-1Q6L8H4 278 aa2.97□□□□□ -1.93
NEK3-203ENST00000551355 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
NEK3-203ENST00000551355 HMCN1Q96RW7 5635 aa2.91□□□□□ -1.94
NEK3-203ENST00000551355 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
NEK3-203ENST00000551355 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
NEK3-203ENST00000551355 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
NEK3-203ENST00000551355 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
NEK3-203ENST00000551355 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
NEK3-203ENST00000551355 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
NEK3-203ENST00000551355 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
NEK3-203ENST00000551355 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
NEK3-203ENST00000551355 INE1O15225 51 aa2.61□□□□□ -1.99
NEK3-203ENST00000551355 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
NEK3-203ENST00000551355 GPR98Q8WXG9 6306 aa2.48□□□□□ -2.01
NEK3-203ENST00000551355 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
NEK3-203ENST00000551355 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
NEK3-203ENST00000551355 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
NEK3-203ENST00000551355 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
NEK3-203ENST00000551355 PRM1P04553 51 aa2.17□□□□□ -2.06
NEK3-203ENST00000551355 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
NEK3-203ENST00000551355 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
NEK3-203ENST00000551355 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
NEK3-203ENST00000551355 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
NEK3-203ENST00000551355 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
NEK3-203ENST00000551355 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
NEK3-203ENST00000551355 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 338.7 ms