RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
RAB5C-208ENST00000551338 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
RAB5C-208ENST00000551338 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
RAB5C-208ENST00000551338 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
RAB5C-208ENST00000551338 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
RAB5C-208ENST00000551338 MT1EP04732 61 aa4.14□□□□□ -1.75
RAB5C-208ENST00000551338 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
RAB5C-208ENST00000551338 MT1LQ93083 61 aa4.09□□□□□ -1.75
RAB5C-208ENST00000551338 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
RAB5C-208ENST00000551338 KMT2DO14686 5537 aa4.05□□□□□ -1.76
RAB5C-208ENST00000551338 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
RAB5C-208ENST00000551338 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
RAB5C-208ENST00000551338 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
RAB5C-208ENST00000551338 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
RAB5C-208ENST00000551338 KRTAP19-3Q7Z4W3 81 aa3.92□□□□□ -1.78
RAB5C-208ENST00000551338 MT1MQ8N339 61 aa3.89□□□□□ -1.79
RAB5C-208ENST00000551338 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
RAB5C-208ENST00000551338 MT1GP13640 62 aa3.87□□□□□ -1.79
RAB5C-208ENST00000551338 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
RAB5C-208ENST00000551338 KRTAP9-7A8MTY7 169 aa3.83□□□□□ -1.8
RAB5C-208ENST00000551338 LCE5AQ5TCM9 118 aa3.82□□□□□ -1.8
RAB5C-208ENST00000551338 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
RAB5C-208ENST00000551338 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
RAB5C-208ENST00000551338 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
RAB5C-208ENST00000551338 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
RAB5C-208ENST00000551338 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
RAB5C-208ENST00000551338 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
RAB5C-208ENST00000551338 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
RAB5C-208ENST00000551338 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
RAB5C-208ENST00000551338 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
RAB5C-208ENST00000551338 SPRR2EP22531 72 aa3.65□□□□□ -1.83
RAB5C-208ENST00000551338 SPRR2BP35325 72 aa3.65□□□□□ -1.83
RAB5C-208ENST00000551338 SPRR2AP35326 72 aa3.65□□□□□ -1.83
RAB5C-208ENST00000551338 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
RAB5C-208ENST00000551338 INE1O15225 51 aa3.53□□□□□ -1.84
RAB5C-208ENST00000551338 SPRR2DP22532 72 aa3.5□□□□□ -1.85
RAB5C-208ENST00000551338 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
RAB5C-208ENST00000551338 MT1AP04731 61 aa3.47□□□□□ -1.85
RAB5C-208ENST00000551338 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
RAB5C-208ENST00000551338 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
RAB5C-208ENST00000551338 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
RAB5C-208ENST00000551338 NEBP20929 6669 aa3.37□□□□□ -1.87
RAB5C-208ENST00000551338 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
RAB5C-208ENST00000551338 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
RAB5C-208ENST00000551338 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
RAB5C-208ENST00000551338 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
RAB5C-208ENST00000551338 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
RAB5C-208ENST00000551338 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
RAB5C-208ENST00000551338 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
RAB5C-208ENST00000551338 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
RAB5C-208ENST00000551338 MT3P25713 68 aa3.09□□□□□ -1.91
RAB5C-208ENST00000551338 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
RAB5C-208ENST00000551338 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
RAB5C-208ENST00000551338 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
RAB5C-208ENST00000551338 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
RAB5C-208ENST00000551338 MT4P47944 62 aa3.04□□□□□ -1.92
RAB5C-208ENST00000551338 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
RAB5C-208ENST00000551338 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
RAB5C-208ENST00000551338 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
RAB5C-208ENST00000551338 PRM1P04553 51 aa2.77□□□□□ -1.97
RAB5C-208ENST00000551338 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
RAB5C-208ENST00000551338 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
RAB5C-208ENST00000551338 AHNAK2Q8IVF2 5795 aa2.68□□□□□ -1.98
RAB5C-208ENST00000551338 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
RAB5C-208ENST00000551338 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
RAB5C-208ENST00000551338 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
RAB5C-208ENST00000551338 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
RAB5C-208ENST00000551338 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
RAB5C-208ENST00000551338 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
RAB5C-208ENST00000551338 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
RAB5C-208ENST00000551338 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
RAB5C-208ENST00000551338 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
RAB5C-208ENST00000551338 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
RAB5C-208ENST00000551338 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
RAB5C-208ENST00000551338 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
RAB5C-208ENST00000551338 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
RAB5C-208ENST00000551338 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
RAB5C-208ENST00000551338 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 358.4 ms