RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 MT1LQ93083 61 aa5.24□□□□□ -1.57
TMEM106C-216ENST00000551305 H3BS24 57 aa5.22□□□□□ -1.57
TMEM106C-216ENST00000551305 KRTAP5-4Q6L8H1 288 aa5.22□□□□□ -1.57
TMEM106C-216ENST00000551305 SPANXA2-OT1Q8N9U9 137 aa5.22□□□□□ -1.57
TMEM106C-216ENST00000551305 SPINT4Q6UDR6 99 aa5.2□□□□□ -1.58
TMEM106C-216ENST00000551305 ATP5EP56381 51 aaPredicted RBP5.19□□□□□ -1.58
TMEM106C-216ENST00000551305 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
TMEM106C-216ENST00000551305 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
TMEM106C-216ENST00000551305 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
TMEM106C-216ENST00000551305 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
TMEM106C-216ENST00000551305 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
TMEM106C-216ENST00000551305 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
TMEM106C-216ENST00000551305 SEC61GP60059 68 aa5.07□□□□□ -1.6
TMEM106C-216ENST00000551305 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
TMEM106C-216ENST00000551305 COA5Q86WW8 74 aa5.07□□□□□ -1.6
TMEM106C-216ENST00000551305 A0A1B0GU33 70 aa5.05□□□□□ -1.6
TMEM106C-216ENST00000551305 SMIM26A0A096LP01 95 aa5.02□□□□□ -1.61
TMEM106C-216ENST00000551305 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
TMEM106C-216ENST00000551305 TNP1P09430 55 aa4.94□□□□□ -1.62
TMEM106C-216ENST00000551305 A8MU10 97 aa4.93□□□□□ -1.62
TMEM106C-216ENST00000551305 Q1T7F1 81 aa4.93□□□□□ -1.62
TMEM106C-216ENST00000551305 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
TMEM106C-216ENST00000551305 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
TMEM106C-216ENST00000551305 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
TMEM106C-216ENST00000551305 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
TMEM106C-216ENST00000551305 V9GYY9 64 aa4.84□□□□□ -1.63
TMEM106C-216ENST00000551305 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
TMEM106C-216ENST00000551305 PSPHP1O15172 72 aa4.81□□□□□ -1.64
TMEM106C-216ENST00000551305 KRTAP12-4P60329 112 aa4.81□□□□□ -1.64
TMEM106C-216ENST00000551305 A0A1B0GU69 56 aa4.8□□□□□ -1.64
TMEM106C-216ENST00000551305 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
TMEM106C-216ENST00000551305 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
TMEM106C-216ENST00000551305 A6NED7 52 aa4.63□□□□□ -1.67
TMEM106C-216ENST00000551305 UQCR11O14957 56 aa4.6□□□□□ -1.67
TMEM106C-216ENST00000551305 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
TMEM106C-216ENST00000551305 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
TMEM106C-216ENST00000551305 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
TMEM106C-216ENST00000551305 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
TMEM106C-216ENST00000551305 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
TMEM106C-216ENST00000551305 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
TMEM106C-216ENST00000551305 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
TMEM106C-216ENST00000551305 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
TMEM106C-216ENST00000551305 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
TMEM106C-216ENST00000551305 KRTAP6-1Q3LI64 71 aa4.46□□□□□ -1.7
TMEM106C-216ENST00000551305 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
TMEM106C-216ENST00000551305 MT1AP04731 61 aa4.43□□□□□ -1.7
TMEM106C-216ENST00000551305 AHNAKQ09666 5890 aaKnown RBP4.38□□□□□ -1.71
TMEM106C-216ENST00000551305 MUC5BQ9HC84 5762 aaPredicted RBP4.38□□□□□ -1.71
TMEM106C-216ENST00000551305 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
TMEM106C-216ENST00000551305 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
TMEM106C-216ENST00000551305 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
TMEM106C-216ENST00000551305 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
TMEM106C-216ENST00000551305 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
TMEM106C-216ENST00000551305 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
TMEM106C-216ENST00000551305 K7ERS5 55 aa4.27□□□□□ -1.73
TMEM106C-216ENST00000551305 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
TMEM106C-216ENST00000551305 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
TMEM106C-216ENST00000551305 ROMO1P60602 79 aa4.18□□□□□ -1.74
TMEM106C-216ENST00000551305 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
TMEM106C-216ENST00000551305 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
TMEM106C-216ENST00000551305 MT3P25713 68 aa4.07□□□□□ -1.76
TMEM106C-216ENST00000551305 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
TMEM106C-216ENST00000551305 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
TMEM106C-216ENST00000551305 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
TMEM106C-216ENST00000551305 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
TMEM106C-216ENST00000551305 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
TMEM106C-216ENST00000551305 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
TMEM106C-216ENST00000551305 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
TMEM106C-216ENST00000551305 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TMEM106C-216ENST00000551305 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
TMEM106C-216ENST00000551305 PHGR1C9JFL3 82 aa3.09□□□□□ -1.92
TMEM106C-216ENST00000551305 KRTAP21-2Q3LI59 83 aa2.94□□□□□ -1.94
TMEM106C-216ENST00000551305 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
TMEM106C-216ENST00000551305 INE1O15225 51 aa2.66□□□□□ -1.98
TMEM106C-216ENST00000551305 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
TMEM106C-216ENST00000551305 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
TMEM106C-216ENST00000551305 PRM1P04553 51 aa2.2□□□□□ -2.06
TMEM106C-216ENST00000551305 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 83.9 ms