RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 KRTAP2-1Q9BYU5 128 aa2.87□□□□□ -1.95
ERBB3-218ENST00000551176 MT1EP04732 61 aa2.85□□□□□ -1.95
ERBB3-218ENST00000551176 ATP5EP56381 51 aaPredicted RBP2.84□□□□□ -1.95
ERBB3-218ENST00000551176 SMIM26A0A096LP01 95 aa2.83□□□□□ -1.96
ERBB3-218ENST00000551176 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
ERBB3-218ENST00000551176 LINC01558Q9Y6Z2 57 aa2.81□□□□□ -1.96
ERBB3-218ENST00000551176 TMEM258P61165 79 aa2.8□□□□□ -1.96
ERBB3-218ENST00000551176 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
ERBB3-218ENST00000551176 C10orf95Q9H7T3 257 aa2.8□□□□□ -1.96
ERBB3-218ENST00000551176 PRR15LQ9BU68 103 aa2.78□□□□□ -1.96
ERBB3-218ENST00000551176 MT3P25713 68 aa2.76□□□□□ -1.97
ERBB3-218ENST00000551176 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
ERBB3-218ENST00000551176 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
ERBB3-218ENST00000551176 TNP1P09430 55 aa2.72□□□□□ -1.97
ERBB3-218ENST00000551176 MT1GP13640 62 aa2.72□□□□□ -1.97
ERBB3-218ENST00000551176 MT1LQ93083 61 aa2.72□□□□□ -1.97
ERBB3-218ENST00000551176 UQCR11O14957 56 aa2.71□□□□□ -1.98
ERBB3-218ENST00000551176 MT1MQ8N339 61 aa2.7□□□□□ -1.98
ERBB3-218ENST00000551176 KRTAP4-3Q9BYR4 195 aa2.68□□□□□ -1.98
ERBB3-218ENST00000551176 MIR22HGQ0VDD5 57 aa2.67□□□□□ -1.98
ERBB3-218ENST00000551176 PP632Q6XCG6 107 aa2.67□□□□□ -1.98
ERBB3-218ENST00000551176 PSPHP1O15172 72 aa2.65□□□□□ -1.99
ERBB3-218ENST00000551176 Q1T7F1 81 aa2.64□□□□□ -1.99
ERBB3-218ENST00000551176 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
ERBB3-218ENST00000551176 V9GYY9 64 aa2.61□□□□□ -1.99
ERBB3-218ENST00000551176 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
ERBB3-218ENST00000551176 KRTAP25-1Q3LHN0 102 aa2.59□□□□□ -1.99
ERBB3-218ENST00000551176 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
ERBB3-218ENST00000551176 K7ERS5 55 aa2.56□□□□□ -2
ERBB3-218ENST00000551176 MT4P47944 62 aa2.56□□□□□ -2
ERBB3-218ENST00000551176 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
ERBB3-218ENST00000551176 A6NED7 52 aa2.54□□□□□ -2
ERBB3-218ENST00000551176 RPS28P62857 69 aaKnown RBP2.52□□□□□ -2.01
ERBB3-218ENST00000551176 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
ERBB3-218ENST00000551176 AHNAK2Q8IVF2 5795 aa2.48□□□□□ -2.01
ERBB3-218ENST00000551176 CDC42SE1Q9NRR8 79 aa2.46□□□□□ -2.02
ERBB3-218ENST00000551176 NDUFAF8A1L188 74 aa2.44□□□□□ -2.02
ERBB3-218ENST00000551176 ROMO1P60602 79 aa2.44□□□□□ -2.02
ERBB3-218ENST00000551176 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
ERBB3-218ENST00000551176 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
ERBB3-218ENST00000551176 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
ERBB3-218ENST00000551176 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
ERBB3-218ENST00000551176 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
ERBB3-218ENST00000551176 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
ERBB3-218ENST00000551176 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
ERBB3-218ENST00000551176 KRTAP9-6A8MVA2 160 aa2.35□□□□□ -2.03
ERBB3-218ENST00000551176 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
ERBB3-218ENST00000551176 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
ERBB3-218ENST00000551176 MT1AP04731 61 aa2.3□□□□□ -2.04
ERBB3-218ENST00000551176 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
ERBB3-218ENST00000551176 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
ERBB3-218ENST00000551176 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
ERBB3-218ENST00000551176 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
ERBB3-218ENST00000551176 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
ERBB3-218ENST00000551176 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
ERBB3-218ENST00000551176 BRK1Q8WUW1 75 aa2.2□□□□□ -2.06
ERBB3-218ENST00000551176 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
ERBB3-218ENST00000551176 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
ERBB3-218ENST00000551176 PMAIP1Q13794 54 aa2.06□□□□□ -2.08
ERBB3-218ENST00000551176 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
ERBB3-218ENST00000551176 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
ERBB3-218ENST00000551176 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
ERBB3-218ENST00000551176 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
ERBB3-218ENST00000551176 LCE3EQ5T5B0 92 aa1.94□□□□□ -2.1
ERBB3-218ENST00000551176 PRO0628Q9UI54 55 aa1.92□□□□□ -2.1
ERBB3-218ENST00000551176 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
ERBB3-218ENST00000551176 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
ERBB3-218ENST00000551176 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
ERBB3-218ENST00000551176 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
ERBB3-218ENST00000551176 LCE3DQ9BYE3 92 aa1.74□□□□□ -2.13
ERBB3-218ENST00000551176 LUZP6Q538Z0 58 aa1.63□□□□□ -2.15
ERBB3-218ENST00000551176 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
ERBB3-218ENST00000551176 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
ERBB3-218ENST00000551176 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
ERBB3-218ENST00000551176 PRM1P04553 51 aa1.26□□□□□ -2.21
ERBB3-218ENST00000551176 INE1O15225 51 aa1.05□□□□□ -2.24
ERBB3-218ENST00000551176 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
ERBB3-218ENST00000551176 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 55.8 ms