RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LCE5AQ5TCM9 118 aa5.66□□□□□ -1.5
PRPF40B-211ENST00000551063 K7ERS5 55 aa5.64□□□□□ -1.51
PRPF40B-211ENST00000551063 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
PRPF40B-211ENST00000551063 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
PRPF40B-211ENST00000551063 MT1GP13640 62 aa5.55□□□□□ -1.52
PRPF40B-211ENST00000551063 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
PRPF40B-211ENST00000551063 PP632Q6XCG6 107 aa5.52□□□□□ -1.53
PRPF40B-211ENST00000551063 MT1LQ93083 61 aa5.51□□□□□ -1.53
PRPF40B-211ENST00000551063 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
PRPF40B-211ENST00000551063 GPR98Q8WXG9 6306 aa5.48□□□□□ -1.53
PRPF40B-211ENST00000551063 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
PRPF40B-211ENST00000551063 MT1MQ8N339 61 aa5.45□□□□□ -1.54
PRPF40B-211ENST00000551063 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
PRPF40B-211ENST00000551063 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
PRPF40B-211ENST00000551063 ROMO1P60602 79 aa5.36□□□□□ -1.55
PRPF40B-211ENST00000551063 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
PRPF40B-211ENST00000551063 KRTAP23-1A1A580 65 aa5.3□□□□□ -1.56
PRPF40B-211ENST00000551063 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
PRPF40B-211ENST00000551063 LCE4AQ5TA78 99 aa5.3□□□□□ -1.56
PRPF40B-211ENST00000551063 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
PRPF40B-211ENST00000551063 MT4P47944 62 aa5.23□□□□□ -1.57
PRPF40B-211ENST00000551063 HMCN1Q96RW7 5635 aa5.2□□□□□ -1.58
PRPF40B-211ENST00000551063 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
PRPF40B-211ENST00000551063 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
PRPF40B-211ENST00000551063 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
PRPF40B-211ENST00000551063 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
PRPF40B-211ENST00000551063 AHNAK2Q8IVF2 5795 aa5.08□□□□□ -1.6
PRPF40B-211ENST00000551063 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
PRPF40B-211ENST00000551063 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
PRPF40B-211ENST00000551063 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
PRPF40B-211ENST00000551063 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
PRPF40B-211ENST00000551063 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
PRPF40B-211ENST00000551063 PRAC1Q96KF2 57 aa4.99□□□□□ -1.61
PRPF40B-211ENST00000551063 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
PRPF40B-211ENST00000551063 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
PRPF40B-211ENST00000551063 KRTAP5-7Q6L8G8 165 aa4.88□□□□□ -1.63
PRPF40B-211ENST00000551063 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
PRPF40B-211ENST00000551063 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
PRPF40B-211ENST00000551063 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
PRPF40B-211ENST00000551063 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
PRPF40B-211ENST00000551063 SVIPQ8NHG7 77 aa4.75□□□□□ -1.65
PRPF40B-211ENST00000551063 MT1AP04731 61 aa4.71□□□□□ -1.66
PRPF40B-211ENST00000551063 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
PRPF40B-211ENST00000551063 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
PRPF40B-211ENST00000551063 KRTAP5-2Q701N4 177 aa4.52□□□□□ -1.69
PRPF40B-211ENST00000551063 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
PRPF40B-211ENST00000551063 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
PRPF40B-211ENST00000551063 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
PRPF40B-211ENST00000551063 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
PRPF40B-211ENST00000551063 MT3P25713 68 aa4.29□□□□□ -1.72
PRPF40B-211ENST00000551063 AHNAKQ09666 5890 aaKnown RBP4.25□□□□□ -1.73
PRPF40B-211ENST00000551063 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
PRPF40B-211ENST00000551063 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
PRPF40B-211ENST00000551063 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.74
PRPF40B-211ENST00000551063 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
PRPF40B-211ENST00000551063 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
PRPF40B-211ENST00000551063 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
PRPF40B-211ENST00000551063 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
PRPF40B-211ENST00000551063 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
PRPF40B-211ENST00000551063 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
PRPF40B-211ENST00000551063 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
PRPF40B-211ENST00000551063 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
PRPF40B-211ENST00000551063 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
PRPF40B-211ENST00000551063 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
PRPF40B-211ENST00000551063 H3BS24 57 aa3.36□□□□□ -1.87
PRPF40B-211ENST00000551063 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
PRPF40B-211ENST00000551063 A0A0A0MQY5 61 aa3.33□□□□□ -1.88
PRPF40B-211ENST00000551063 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
PRPF40B-211ENST00000551063 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
PRPF40B-211ENST00000551063 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
PRPF40B-211ENST00000551063 INE1O15225 51 aa3.18□□□□□ -1.9
PRPF40B-211ENST00000551063 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
PRPF40B-211ENST00000551063 PHGR1C9JFL3 82 aa2.96□□□□□ -1.94
PRPF40B-211ENST00000551063 PRM1P04553 51 aa2.77□□□□□ -1.97
PRPF40B-211ENST00000551063 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
PRPF40B-211ENST00000551063 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
PRPF40B-211ENST00000551063 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
PRPF40B-211ENST00000551063 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 91 ms