RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 KRTAP10-4P60372 401 aaPredicted RBP1.47□□□□□ -2.17
ATP2B1-208ENST00000551009 LPAP08519 4548 aa1.47□□□□□ -2.17
ATP2B1-208ENST00000551009 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
ATP2B1-208ENST00000551009 H3BUX3 64 aa1.44□□□□□ -2.18
ATP2B1-208ENST00000551009 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
ATP2B1-208ENST00000551009 DEFB136Q30KP8 78 aa1.42□□□□□ -2.18
ATP2B1-208ENST00000551009 SMR3BP02814 79 aaPredicted RBP1.4□□□□□ -2.19
ATP2B1-208ENST00000551009 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
ATP2B1-208ENST00000551009 USH2AO75445 5202 aa1.38□□□□□ -2.19
ATP2B1-208ENST00000551009 NEBP20929 6669 aa1.36□□□□□ -2.19
ATP2B1-208ENST00000551009 M0QZ58 72 aa1.35□□□□□ -2.19
ATP2B1-208ENST00000551009 APELAP0DMC3 54 aa1.35□□□□□ -2.19
ATP2B1-208ENST00000551009 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
ATP2B1-208ENST00000551009 DEFB4AO15263 64 aa1.33□□□□□ -2.2
ATP2B1-208ENST00000551009 MT1HL1P0DM35 61 aa1.33□□□□□ -2.2
ATP2B1-208ENST00000551009 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
ATP2B1-208ENST00000551009 DEFB135Q30KP9 77 aa1.32□□□□□ -2.2
ATP2B1-208ENST00000551009 HTN1P15515 57 aa1.3□□□□□ -2.2
ATP2B1-208ENST00000551009 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
ATP2B1-208ENST00000551009 GPR98Q8WXG9 6306 aa1.3□□□□□ -2.2
ATP2B1-208ENST00000551009 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
ATP2B1-208ENST00000551009 RHPN1-AS1Q9BWJ2 59 aa1.28□□□□□ -2.2
ATP2B1-208ENST00000551009 KMT2DO14686 5537 aa1.27□□□□□ -2.21
ATP2B1-208ENST00000551009 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
ATP2B1-208ENST00000551009 TNP1P09430 55 aa1.25□□□□□ -2.21
ATP2B1-208ENST00000551009 SPART-AS1P0CW21 52 aa1.25□□□□□ -2.21
ATP2B1-208ENST00000551009 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
ATP2B1-208ENST00000551009 M0R2T5 61 aa1.24□□□□□ -2.21
ATP2B1-208ENST00000551009 SPINK6Q6UWN8 80 aa1.24□□□□□ -2.21
ATP2B1-208ENST00000551009 DEFB1P60022 68 aa1.23□□□□□ -2.21
ATP2B1-208ENST00000551009 FLGP20930 4061 aaPredicted RBP1.22□□□□□ -2.21
ATP2B1-208ENST00000551009 HTN3P15516 51 aa1.22□□□□□ -2.21
ATP2B1-208ENST00000551009 A0A096LNI7 61 aa1.21□□□□□ -2.22
ATP2B1-208ENST00000551009 KRTAP20-1Q3LI63 56 aa1.21□□□□□ -2.22
ATP2B1-208ENST00000551009 C9orf92A6NGG3 77 aa1.2□□□□□ -2.22
ATP2B1-208ENST00000551009 KRTAP5-10Q6L8G5 202 aa1.2□□□□□ -2.22
ATP2B1-208ENST00000551009 H3BNG1 76 aa1.18□□□□□ -2.22
ATP2B1-208ENST00000551009 MT1HP80294 61 aa1.15□□□□□ -2.23
ATP2B1-208ENST00000551009 KRTAP19-2Q3LHN2 52 aa1.15□□□□□ -2.23
ATP2B1-208ENST00000551009 A0A096LPF7 62 aa1.12□□□□□ -2.23
ATP2B1-208ENST00000551009 DSTQ03001 7570 aaKnown RBP1.1□□□□□ -2.23
ATP2B1-208ENST00000551009 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
ATP2B1-208ENST00000551009 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
ATP2B1-208ENST00000551009 KRTAP19-6Q3LI70 58 aa1.06□□□□□ -2.24
ATP2B1-208ENST00000551009 LINC01556Q5JQF7 62 aa1.05□□□□□ -2.24
ATP2B1-208ENST00000551009 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
ATP2B1-208ENST00000551009 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
ATP2B1-208ENST00000551009 MT2AP02795 61 aa1.02□□□□□ -2.25
ATP2B1-208ENST00000551009 MT1FP04733 61 aa1.02□□□□□ -2.25
ATP2B1-208ENST00000551009 AHNAKQ09666 5890 aaKnown RBP1.01□□□□□ -2.25
ATP2B1-208ENST00000551009 PRM1P04553 51 aa0.98□□□□□ -2.25
ATP2B1-208ENST00000551009 SPRR2EP22531 72 aa0.98□□□□□ -2.25
ATP2B1-208ENST00000551009 SPRR2BP35325 72 aa0.98□□□□□ -2.25
ATP2B1-208ENST00000551009 SPRR2AP35326 72 aa0.98□□□□□ -2.25
ATP2B1-208ENST00000551009 RPS29P62273 56 aaKnown RBP0.98□□□□□ -2.25
ATP2B1-208ENST00000551009 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
ATP2B1-208ENST00000551009 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
ATP2B1-208ENST00000551009 SPRR2DP22532 72 aa0.95□□□□□ -2.26
ATP2B1-208ENST00000551009 SPRR2FQ96RM1 72 aa0.94□□□□□ -2.26
ATP2B1-208ENST00000551009 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
ATP2B1-208ENST00000551009 MT4P47944 62 aa0.88□□□□□ -2.27
ATP2B1-208ENST00000551009 MT1BP07438 61 aa0.87□□□□□ -2.27
ATP2B1-208ENST00000551009 MT1AP04731 61 aa0.82□□□□□ -2.28
ATP2B1-208ENST00000551009 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
ATP2B1-208ENST00000551009 KRTAP19-5Q3LI72 72 aa0.76□□□□□ -2.29
ATP2B1-208ENST00000551009 SYNE1Q8NF91 8797 aaKnown RBP0.75□□□□□ -2.29
ATP2B1-208ENST00000551009 MT1XP80297 61 aa0.75□□□□□ -2.29
ATP2B1-208ENST00000551009 KRTAP20-2Q3LI61 65 aa0.75□□□□□ -2.29
ATP2B1-208ENST00000551009 KRTAP6-2Q3LI66 62 aa0.75□□□□□ -2.29
ATP2B1-208ENST00000551009 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
ATP2B1-208ENST00000551009 SPRR2GQ9BYE4 73 aa0.73□□□□□ -2.29
ATP2B1-208ENST00000551009 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
ATP2B1-208ENST00000551009 MT1EP04732 61 aa0.66□□□□□ -2.3
ATP2B1-208ENST00000551009 MT1MQ8N339 61 aa0.65□□□□□ -2.31
ATP2B1-208ENST00000551009 MT1GP13640 62 aa0.62□□□□□ -2.31
ATP2B1-208ENST00000551009 MT1LQ93083 61 aa0.59□□□□□ -2.31
ATP2B1-208ENST00000551009 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
ATP2B1-208ENST00000551009 KRTAP6-1Q3LI64 71 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 72.4 ms