RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 AEBP2Q6ZN18 517 aaPredicted RBP34.12■■■■□ 3.05
ATP2B1-208ENST00000551009 CHIC1Q5VXU3 224 aa31.74■■■□□ 2.67
ATP2B1-208ENST00000551009 SENP3Q9H4L4 574 aaPredicted RBP29.12■■■□□ 2.25
ATP2B1-208ENST00000551009 PHF23Q9BUL5 403 aaPredicted RBP28.68■■■□□ 2.18
ATP2B1-208ENST00000551009 FOXD1Q16676 465 aa27.33■■□□□ 1.97
ATP2B1-208ENST00000551009 POTEDQ86YR6 584 aa26.76■■□□□ 1.87
ATP2B1-208ENST00000551009 MSH5O43196 834 aa25.82■■□□□ 1.72
ATP2B1-208ENST00000551009 PIAS4Q8N2W9 510 aaPredicted RBP25.28■■□□□ 1.64
ATP2B1-208ENST00000551009 PPP6R1Q9UPN7 881 aa24.92■■□□□ 1.58
ATP2B1-208ENST00000551009 ADRA2BP18089 450 aa24.77■■□□□ 1.56
ATP2B1-208ENST00000551009 PLPPR3Q6T4P5 718 aa24.72■■□□□ 1.55
ATP2B1-208ENST00000551009 MAPK8IP2Q13387 824 aaPredicted RBP23.04■■□□□ 1.28
ATP2B1-208ENST00000551009 DMRT2Q9Y5R5 561 aa22.99■■□□□ 1.27
ATP2B1-208ENST00000551009 CACNB1Q02641 598 aaPredicted RBP22.71■■□□□ 1.23
ATP2B1-208ENST00000551009 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
ATP2B1-208ENST00000551009 DCAF8L1A6NGE4 600 aa22.08■■□□□ 1.13
ATP2B1-208ENST00000551009 RNF39Q9H2S5 420 aa21.99■■□□□ 1.11
ATP2B1-208ENST00000551009 HOXD11P31277 338 aaPredicted RBP21.81■■□□□ 1.08
ATP2B1-208ENST00000551009 PPP4R3CPQ6ZMV5 832 aa21.6■■□□□ 1.05
ATP2B1-208ENST00000551009 C1QBPQ07021 282 aaKnown RBP21.58■■□□□ 1.05
ATP2B1-208ENST00000551009 RNF216Q9NWF9 866 aaPredicted RBP21.39■■□□□ 1.01
ATP2B1-208ENST00000551009 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
ATP2B1-208ENST00000551009 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
ATP2B1-208ENST00000551009 POTEHQ6S545 545 aa20.77■□□□□ 0.92
ATP2B1-208ENST00000551009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.75■□□□□ 0.91
ATP2B1-208ENST00000551009 NCBP3Q53F19 620 aaKnown RBP20.42■□□□□ 0.86
ATP2B1-208ENST00000551009 DSG3P32926 999 aa20.33■□□□□ 0.85
ATP2B1-208ENST00000551009 U3KPZ7 1027 aaPredicted RBP20.27■□□□□ 0.84
ATP2B1-208ENST00000551009 SPINK5Q9NQ38 1064 aaPredicted RBP20.26■□□□□ 0.83
ATP2B1-208ENST00000551009 NPM3O75607 178 aaKnown RBP20.23■□□□□ 0.83
ATP2B1-208ENST00000551009 CAPN15O75808 1086 aa20.2■□□□□ 0.82
ATP2B1-208ENST00000551009 ABCB7O75027 752 aa19.71■□□□□ 0.75
ATP2B1-208ENST00000551009 TRHP20396 242 aaPredicted RBP19.69■□□□□ 0.74
ATP2B1-208ENST00000551009 SLC4A2P04920 1241 aa19.57■□□□□ 0.72
ATP2B1-208ENST00000551009 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
ATP2B1-208ENST00000551009 APLP2Q06481 763 aa19.47■□□□□ 0.71
ATP2B1-208ENST00000551009 KCNA4P22459 653 aa19.44■□□□□ 0.7
ATP2B1-208ENST00000551009 RBM42Q9BTD8 480 aaKnown RBP19.33■□□□□ 0.68
ATP2B1-208ENST00000551009 CHRDL2Q6WN34 429 aa19.3■□□□□ 0.68
ATP2B1-208ENST00000551009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
ATP2B1-208ENST00000551009 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
ATP2B1-208ENST00000551009 SAMD1Q6SPF0 538 aaPredicted RBP19.15■□□□□ 0.66
ATP2B1-208ENST00000551009 SP7Q8TDD2 431 aaPredicted RBP19.06■□□□□ 0.64
ATP2B1-208ENST00000551009 POLA2Q14181 598 aa18.96■□□□□ 0.63
ATP2B1-208ENST00000551009 AKT1S1Q96B36 256 aa18.74■□□□□ 0.59
ATP2B1-208ENST00000551009 PIP4P2Q8N4L2 257 aa18.69■□□□□ 0.58
ATP2B1-208ENST00000551009 MYCNP04198 464 aaPredicted RBP18.67■□□□□ 0.58
ATP2B1-208ENST00000551009 REM2Q8IYK8 340 aaPredicted RBP18.6■□□□□ 0.57
ATP2B1-208ENST00000551009 HAX1O00165 279 aa18.55■□□□□ 0.56
ATP2B1-208ENST00000551009 FXR2P51116 673 aaKnown RBP eCLIP18.43■□□□□ 0.54
ATP2B1-208ENST00000551009 PITPNM1O00562 1244 aa18.42■□□□□ 0.54
ATP2B1-208ENST00000551009 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
ATP2B1-208ENST00000551009 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
ATP2B1-208ENST00000551009 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
ATP2B1-208ENST00000551009 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
ATP2B1-208ENST00000551009 EVX2Q03828 476 aa18.35■□□□□ 0.53
ATP2B1-208ENST00000551009 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
ATP2B1-208ENST00000551009 PRKAR2AP13861 404 aaKnown RBP17.92■□□□□ 0.46
ATP2B1-208ENST00000551009 ZBTB22O15209 634 aa17.91■□□□□ 0.46
ATP2B1-208ENST00000551009 C19orf67A6NJJ6 358 aa17.87■□□□□ 0.45
ATP2B1-208ENST00000551009 LHX8Q68G74 356 aa17.87■□□□□ 0.45
ATP2B1-208ENST00000551009 GABBR2O75899 941 aa17.83■□□□□ 0.44
ATP2B1-208ENST00000551009 SPDYE2BA6NHP3 402 aa17.82■□□□□ 0.44
ATP2B1-208ENST00000551009 SPDYE6P0CI01 402 aa17.82■□□□□ 0.44
ATP2B1-208ENST00000551009 SPDYE2Q495Y8 402 aa17.82■□□□□ 0.44
ATP2B1-208ENST00000551009 CLEC11AQ9Y240 323 aa17.77■□□□□ 0.44
ATP2B1-208ENST00000551009 SPDYE1Q8NFV5 336 aaPredicted RBP17.72■□□□□ 0.43
ATP2B1-208ENST00000551009 FBLN2P98095 1184 aa17.62■□□□□ 0.41
ATP2B1-208ENST00000551009 CHADLQ6NUI6 762 aa17.58■□□□□ 0.4
ATP2B1-208ENST00000551009 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
ATP2B1-208ENST00000551009 ATXN8OSP0DMR3 200 aa17.52■□□□□ 0.4
ATP2B1-208ENST00000551009 MKRN4PQ13434 485 aaPredicted RBP17.5■□□□□ 0.39
ATP2B1-208ENST00000551009 POTEIP0CG38 1075 aa17.49■□□□□ 0.39
ATP2B1-208ENST00000551009 ZNF692Q9BU19 519 aaPredicted RBP17.49■□□□□ 0.39
ATP2B1-208ENST00000551009 PLSCR2Q9NRY7 297 aa17.45■□□□□ 0.38
ATP2B1-208ENST00000551009 PRR29P0C7W0 189 aa17.34■□□□□ 0.37
ATP2B1-208ENST00000551009 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
ATP2B1-208ENST00000551009 CD44P16070 742 aaKnown RBP17.29■□□□□ 0.36
ATP2B1-208ENST00000551009 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
ATP2B1-208ENST00000551009 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATP2B1-208ENST00000551009 FARP1Q9Y4F1 1045 aaPredicted RBP17.18■□□□□ 0.34
ATP2B1-208ENST00000551009 CLCN6P51797 869 aa17.13■□□□□ 0.33
ATP2B1-208ENST00000551009 DCBLD2Q96PD2 775 aa17.11■□□□□ 0.33
ATP2B1-208ENST00000551009 ZNF579Q8NAF0 562 aaKnown RBP16.98■□□□□ 0.31
ATP2B1-208ENST00000551009 OTUD5Q96G74 571 aa16.98■□□□□ 0.31
ATP2B1-208ENST00000551009 ZRANB1Q9UGI0 708 aa16.92■□□□□ 0.3
ATP2B1-208ENST00000551009 POTEB2H3BUK9 544 aa16.91■□□□□ 0.3
ATP2B1-208ENST00000551009 GALR2O43603 387 aaPredicted RBP16.88■□□□□ 0.29
ATP2B1-208ENST00000551009 POTEMA6NI47 508 aa16.87■□□□□ 0.29
ATP2B1-208ENST00000551009 POTEGQ6S5H5 508 aa16.79■□□□□ 0.28
ATP2B1-208ENST00000551009 CREBZFQ9NS37 354 aa16.76■□□□□ 0.27
ATP2B1-208ENST00000551009 PELP1Q8IZL8 1130 aaKnown RBP16.66■□□□□ 0.26
ATP2B1-208ENST00000551009 PHF12Q96QT6 1004 aa16.65■□□□□ 0.26
ATP2B1-208ENST00000551009 PCDH10Q9P2E7 1040 aa16.57■□□□□ 0.24
ATP2B1-208ENST00000551009 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
ATP2B1-208ENST00000551009 PAK3O75914 559 aaPredicted RBP16.52■□□□□ 0.24
ATP2B1-208ENST00000551009 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
ATP2B1-208ENST00000551009 METRNQ9UJH8 293 aa16.48■□□□□ 0.23
ATP2B1-208ENST00000551009 LCE2DQ5TA82 110 aaPredicted RBP16.47■□□□□ 0.23
ATP2B1-208ENST00000551009 ASTLQ6HA08 431 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms