RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 SPANXA2-OT1Q8N9U9 137 aa3.9□□□□□ -1.79
PFDN5-212ENST00000550880 Q1T7F1 81 aa3.88□□□□□ -1.79
PFDN5-212ENST00000550880 BRK1Q8WUW1 75 aa3.88□□□□□ -1.79
PFDN5-212ENST00000550880 MT1LQ93083 61 aa3.88□□□□□ -1.79
PFDN5-212ENST00000550880 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
PFDN5-212ENST00000550880 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
PFDN5-212ENST00000550880 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
PFDN5-212ENST00000550880 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
PFDN5-212ENST00000550880 PSPHP1O15172 72 aa3.76□□□□□ -1.81
PFDN5-212ENST00000550880 SEC61GP60059 68 aa3.76□□□□□ -1.81
PFDN5-212ENST00000550880 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
PFDN5-212ENST00000550880 COA5Q86WW8 74 aa3.75□□□□□ -1.81
PFDN5-212ENST00000550880 PRR15LQ9BU68 103 aa3.74□□□□□ -1.81
PFDN5-212ENST00000550880 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
PFDN5-212ENST00000550880 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
PFDN5-212ENST00000550880 SPATA8Q6RVD6 105 aa3.72□□□□□ -1.81
PFDN5-212ENST00000550880 A6NED7 52 aa3.71□□□□□ -1.82
PFDN5-212ENST00000550880 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
PFDN5-212ENST00000550880 LINC01558Q9Y6Z2 57 aa3.7□□□□□ -1.82
PFDN5-212ENST00000550880 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
PFDN5-212ENST00000550880 TNP1P09430 55 aa3.68□□□□□ -1.82
PFDN5-212ENST00000550880 CDC42SE1Q9NRR8 79 aa3.68□□□□□ -1.82
PFDN5-212ENST00000550880 A0A1B0GU33 70 aa3.67□□□□□ -1.82
PFDN5-212ENST00000550880 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
PFDN5-212ENST00000550880 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
PFDN5-212ENST00000550880 KTN1-AS1Q86SY8 53 aa3.63□□□□□ -1.83
PFDN5-212ENST00000550880 A0A1B0GU69 56 aa3.6□□□□□ -1.83
PFDN5-212ENST00000550880 KRTAP12-3P60328 96 aa3.59□□□□□ -1.83
PFDN5-212ENST00000550880 UQCR11O14957 56 aa3.55□□□□□ -1.84
PFDN5-212ENST00000550880 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
PFDN5-212ENST00000550880 KRTAP4-11Q9BYQ6 195 aa3.54□□□□□ -1.84
PFDN5-212ENST00000550880 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
PFDN5-212ENST00000550880 A8MU10 97 aa3.5□□□□□ -1.85
PFDN5-212ENST00000550880 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
PFDN5-212ENST00000550880 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
PFDN5-212ENST00000550880 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
PFDN5-212ENST00000550880 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
PFDN5-212ENST00000550880 K7ERS5 55 aa3.42□□□□□ -1.86
PFDN5-212ENST00000550880 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
PFDN5-212ENST00000550880 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
PFDN5-212ENST00000550880 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
PFDN5-212ENST00000550880 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
PFDN5-212ENST00000550880 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
PFDN5-212ENST00000550880 MT1AP04731 61 aa3.31□□□□□ -1.88
PFDN5-212ENST00000550880 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
PFDN5-212ENST00000550880 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
PFDN5-212ENST00000550880 H3BS24 57 aa3.28□□□□□ -1.88
PFDN5-212ENST00000550880 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
PFDN5-212ENST00000550880 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
PFDN5-212ENST00000550880 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
PFDN5-212ENST00000550880 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
PFDN5-212ENST00000550880 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
PFDN5-212ENST00000550880 ROMO1P60602 79 aa3.22□□□□□ -1.89
PFDN5-212ENST00000550880 KRTAP23-1A1A580 65 aa3.14□□□□□ -1.91
PFDN5-212ENST00000550880 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
PFDN5-212ENST00000550880 MT3P25713 68 aa3.08□□□□□ -1.92
PFDN5-212ENST00000550880 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
PFDN5-212ENST00000550880 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
PFDN5-212ENST00000550880 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
PFDN5-212ENST00000550880 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
PFDN5-212ENST00000550880 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
PFDN5-212ENST00000550880 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
PFDN5-212ENST00000550880 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
PFDN5-212ENST00000550880 LCE1CQ5T751 118 aa2.68□□□□□ -1.98
PFDN5-212ENST00000550880 KRTAP4-12Q9BQ66 201 aa2.61□□□□□ -1.99
PFDN5-212ENST00000550880 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
PFDN5-212ENST00000550880 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
PFDN5-212ENST00000550880 INE1O15225 51 aa2.46□□□□□ -2.02
PFDN5-212ENST00000550880 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
PFDN5-212ENST00000550880 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
PFDN5-212ENST00000550880 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
PFDN5-212ENST00000550880 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
PFDN5-212ENST00000550880 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
PFDN5-212ENST00000550880 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
PFDN5-212ENST00000550880 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
PFDN5-212ENST00000550880 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
PFDN5-212ENST00000550880 PRM1P04553 51 aa1.67□□□□□ -2.14
PFDN5-212ENST00000550880 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms