RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 KRTAP25-1Q3LHN0 102 aa5.99□□□□□ -1.45
CHMP1A-209ENST00000550872 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
CHMP1A-209ENST00000550872 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
CHMP1A-209ENST00000550872 ROMO1P60602 79 aa5.85□□□□□ -1.47
CHMP1A-209ENST00000550872 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
CHMP1A-209ENST00000550872 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
CHMP1A-209ENST00000550872 MT1GP13640 62 aa5.8□□□□□ -1.48
CHMP1A-209ENST00000550872 MT1LQ93083 61 aa5.8□□□□□ -1.48
CHMP1A-209ENST00000550872 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
CHMP1A-209ENST00000550872 PP632Q6XCG6 107 aa5.75□□□□□ -1.49
CHMP1A-209ENST00000550872 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
CHMP1A-209ENST00000550872 MT1MQ8N339 61 aa5.69□□□□□ -1.5
CHMP1A-209ENST00000550872 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
CHMP1A-209ENST00000550872 GPR98Q8WXG9 6306 aa5.63□□□□□ -1.51
CHMP1A-209ENST00000550872 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
CHMP1A-209ENST00000550872 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
CHMP1A-209ENST00000550872 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
CHMP1A-209ENST00000550872 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
CHMP1A-209ENST00000550872 KRTAP19-4Q3LI73 84 aa5.49□□□□□ -1.53
CHMP1A-209ENST00000550872 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
CHMP1A-209ENST00000550872 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
CHMP1A-209ENST00000550872 LCE4AQ5TA78 99 aa5.39□□□□□ -1.55
CHMP1A-209ENST00000550872 LCE3CQ5T5A8 94 aa5.38□□□□□ -1.55
CHMP1A-209ENST00000550872 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.56
CHMP1A-209ENST00000550872 MT4P47944 62 aa5.3□□□□□ -1.56
CHMP1A-209ENST00000550872 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
CHMP1A-209ENST00000550872 KRTAP5-4Q6L8H1 288 aa5.24□□□□□ -1.57
CHMP1A-209ENST00000550872 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
CHMP1A-209ENST00000550872 KRTAP5-10Q6L8G5 202 aa5.21□□□□□ -1.58
CHMP1A-209ENST00000550872 AHNAK2Q8IVF2 5795 aa5.18□□□□□ -1.58
CHMP1A-209ENST00000550872 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
CHMP1A-209ENST00000550872 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
CHMP1A-209ENST00000550872 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
CHMP1A-209ENST00000550872 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
CHMP1A-209ENST00000550872 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
CHMP1A-209ENST00000550872 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
CHMP1A-209ENST00000550872 KRTAP12-4P60329 112 aa5□□□□□ -1.61
CHMP1A-209ENST00000550872 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
CHMP1A-209ENST00000550872 SPRR5A0A1B0GTR4 108 aa4.94□□□□□ -1.62
CHMP1A-209ENST00000550872 MT1AP04731 61 aa4.94□□□□□ -1.62
CHMP1A-209ENST00000550872 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
CHMP1A-209ENST00000550872 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
CHMP1A-209ENST00000550872 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
CHMP1A-209ENST00000550872 SVIPQ8NHG7 77 aa4.74□□□□□ -1.65
CHMP1A-209ENST00000550872 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
CHMP1A-209ENST00000550872 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
CHMP1A-209ENST00000550872 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
CHMP1A-209ENST00000550872 KRTAP4-11Q9BYQ6 195 aa4.59□□□□□ -1.67
CHMP1A-209ENST00000550872 MT3P25713 68 aa4.52□□□□□ -1.69
CHMP1A-209ENST00000550872 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
CHMP1A-209ENST00000550872 MUC5ACP98088 5654 aa4.37□□□□□ -1.71
CHMP1A-209ENST00000550872 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
CHMP1A-209ENST00000550872 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
CHMP1A-209ENST00000550872 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
CHMP1A-209ENST00000550872 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
CHMP1A-209ENST00000550872 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
CHMP1A-209ENST00000550872 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
CHMP1A-209ENST00000550872 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CHMP1A-209ENST00000550872 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
CHMP1A-209ENST00000550872 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
CHMP1A-209ENST00000550872 KRTAP4-2Q9BYR5 136 aa3.79□□□□□ -1.8
CHMP1A-209ENST00000550872 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
CHMP1A-209ENST00000550872 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
CHMP1A-209ENST00000550872 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
CHMP1A-209ENST00000550872 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
CHMP1A-209ENST00000550872 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
CHMP1A-209ENST00000550872 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
CHMP1A-209ENST00000550872 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
CHMP1A-209ENST00000550872 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
CHMP1A-209ENST00000550872 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
CHMP1A-209ENST00000550872 INE1O15225 51 aa3.05□□□□□ -1.92
CHMP1A-209ENST00000550872 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
CHMP1A-209ENST00000550872 PRM1P04553 51 aa3.01□□□□□ -1.93
CHMP1A-209ENST00000550872 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
CHMP1A-209ENST00000550872 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
CHMP1A-209ENST00000550872 H3BS24 57 aa2.66□□□□□ -1.98
CHMP1A-209ENST00000550872 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
CHMP1A-209ENST00000550872 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 94.1 ms