RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
TROAP-213ENST00000550709 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
TROAP-213ENST00000550709 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
TROAP-213ENST00000550709 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
TROAP-213ENST00000550709 MT1LQ93083 61 aa4.91□□□□□ -1.62
TROAP-213ENST00000550709 MT1GP13640 62 aa4.9□□□□□ -1.63
TROAP-213ENST00000550709 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
TROAP-213ENST00000550709 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
TROAP-213ENST00000550709 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
TROAP-213ENST00000550709 MT1MQ8N339 61 aa4.83□□□□□ -1.64
TROAP-213ENST00000550709 ROMO1P60602 79 aa4.79□□□□□ -1.64
TROAP-213ENST00000550709 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
TROAP-213ENST00000550709 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
TROAP-213ENST00000550709 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
TROAP-213ENST00000550709 H3BS24 57 aa4.73□□□□□ -1.65
TROAP-213ENST00000550709 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
TROAP-213ENST00000550709 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
TROAP-213ENST00000550709 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
TROAP-213ENST00000550709 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
TROAP-213ENST00000550709 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
TROAP-213ENST00000550709 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
TROAP-213ENST00000550709 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
TROAP-213ENST00000550709 MT4P47944 62 aa4.5□□□□□ -1.69
TROAP-213ENST00000550709 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
TROAP-213ENST00000550709 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
TROAP-213ENST00000550709 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
TROAP-213ENST00000550709 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
TROAP-213ENST00000550709 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
TROAP-213ENST00000550709 KRTAP5-4Q6L8H1 288 aa4.46□□□□□ -1.7
TROAP-213ENST00000550709 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
TROAP-213ENST00000550709 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
TROAP-213ENST00000550709 KRTAP5-5Q701N2 237 aaPredicted RBP4.38□□□□□ -1.71
TROAP-213ENST00000550709 KRTAP4-6Q9BYQ5 205 aa4.38□□□□□ -1.71
TROAP-213ENST00000550709 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
TROAP-213ENST00000550709 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
TROAP-213ENST00000550709 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
TROAP-213ENST00000550709 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
TROAP-213ENST00000550709 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
TROAP-213ENST00000550709 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
TROAP-213ENST00000550709 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
TROAP-213ENST00000550709 MT1AP04731 61 aa4.16□□□□□ -1.74
TROAP-213ENST00000550709 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
TROAP-213ENST00000550709 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
TROAP-213ENST00000550709 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
TROAP-213ENST00000550709 KTN1-AS1Q86SY8 53 aa4.12□□□□□ -1.75
TROAP-213ENST00000550709 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
TROAP-213ENST00000550709 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
TROAP-213ENST00000550709 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
TROAP-213ENST00000550709 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
TROAP-213ENST00000550709 MT3P25713 68 aa3.81□□□□□ -1.8
TROAP-213ENST00000550709 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
TROAP-213ENST00000550709 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
TROAP-213ENST00000550709 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
TROAP-213ENST00000550709 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
TROAP-213ENST00000550709 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
TROAP-213ENST00000550709 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
TROAP-213ENST00000550709 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
TROAP-213ENST00000550709 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
TROAP-213ENST00000550709 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
TROAP-213ENST00000550709 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
TROAP-213ENST00000550709 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
TROAP-213ENST00000550709 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
TROAP-213ENST00000550709 KRTAP4-2Q9BYR5 136 aa3.23□□□□□ -1.89
TROAP-213ENST00000550709 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
TROAP-213ENST00000550709 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
TROAP-213ENST00000550709 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
TROAP-213ENST00000550709 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
TROAP-213ENST00000550709 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
TROAP-213ENST00000550709 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
TROAP-213ENST00000550709 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
TROAP-213ENST00000550709 INE1O15225 51 aa2.69□□□□□ -1.98
TROAP-213ENST00000550709 PHGR1C9JFL3 82 aa2.58□□□□□ -2
TROAP-213ENST00000550709 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
TROAP-213ENST00000550709 PRM1P04553 51 aa2.47□□□□□ -2.01
TROAP-213ENST00000550709 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
TROAP-213ENST00000550709 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
TROAP-213ENST00000550709 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 100.7 ms