RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
CHPT1-206ENST00000550385 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
CHPT1-206ENST00000550385 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
CHPT1-206ENST00000550385 MT3P25713 68 aa4.19□□□□□ -1.74
CHPT1-206ENST00000550385 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
CHPT1-206ENST00000550385 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
CHPT1-206ENST00000550385 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
CHPT1-206ENST00000550385 KRTAP8-1Q8IUC2 63 aa4.06□□□□□ -1.76
CHPT1-206ENST00000550385 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
CHPT1-206ENST00000550385 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
CHPT1-206ENST00000550385 KMT2DO14686 5537 aa4.01□□□□□ -1.77
CHPT1-206ENST00000550385 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
CHPT1-206ENST00000550385 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
CHPT1-206ENST00000550385 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
CHPT1-206ENST00000550385 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
CHPT1-206ENST00000550385 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
CHPT1-206ENST00000550385 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
CHPT1-206ENST00000550385 KRTAP19-7Q3SYF9 63 aa3.93□□□□□ -1.78
CHPT1-206ENST00000550385 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
CHPT1-206ENST00000550385 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
CHPT1-206ENST00000550385 MT1EP04732 61 aa3.88□□□□□ -1.79
CHPT1-206ENST00000550385 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
CHPT1-206ENST00000550385 MT1GP13640 62 aa3.78□□□□□ -1.8
CHPT1-206ENST00000550385 SPRR2EP22531 72 aa3.78□□□□□ -1.8
CHPT1-206ENST00000550385 SPRR2BP35325 72 aa3.78□□□□□ -1.8
CHPT1-206ENST00000550385 SPRR2AP35326 72 aa3.78□□□□□ -1.8
CHPT1-206ENST00000550385 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
CHPT1-206ENST00000550385 MT1LQ93083 61 aa3.78□□□□□ -1.8
CHPT1-206ENST00000550385 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
CHPT1-206ENST00000550385 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
CHPT1-206ENST00000550385 NEBP20929 6669 aa3.71□□□□□ -1.82
CHPT1-206ENST00000550385 LCE3CQ5T5A8 94 aa3.67□□□□□ -1.82
CHPT1-206ENST00000550385 MT1MQ8N339 61 aa3.67□□□□□ -1.82
CHPT1-206ENST00000550385 SPRR2DP22532 72 aa3.65□□□□□ -1.83
CHPT1-206ENST00000550385 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
CHPT1-206ENST00000550385 DSTQ03001 7570 aaKnown RBP3.53□□□□□ -1.84
CHPT1-206ENST00000550385 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
CHPT1-206ENST00000550385 KRTAP4-3Q9BYR4 195 aa3.53□□□□□ -1.84
CHPT1-206ENST00000550385 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
CHPT1-206ENST00000550385 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
CHPT1-206ENST00000550385 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
CHPT1-206ENST00000550385 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
CHPT1-206ENST00000550385 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
CHPT1-206ENST00000550385 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CHPT1-206ENST00000550385 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
CHPT1-206ENST00000550385 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
CHPT1-206ENST00000550385 KRTAP5-5Q701N2 237 aaPredicted RBP3.31□□□□□ -1.88
CHPT1-206ENST00000550385 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
CHPT1-206ENST00000550385 MT1AP04731 61 aa3.24□□□□□ -1.89
CHPT1-206ENST00000550385 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
CHPT1-206ENST00000550385 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
CHPT1-206ENST00000550385 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CHPT1-206ENST00000550385 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
CHPT1-206ENST00000550385 MT4P47944 62 aa3.14□□□□□ -1.91
CHPT1-206ENST00000550385 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CHPT1-206ENST00000550385 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
CHPT1-206ENST00000550385 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
CHPT1-206ENST00000550385 KRTAP6-2Q3LI66 62 aa2.95□□□□□ -1.94
CHPT1-206ENST00000550385 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
CHPT1-206ENST00000550385 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
CHPT1-206ENST00000550385 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
CHPT1-206ENST00000550385 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
CHPT1-206ENST00000550385 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
CHPT1-206ENST00000550385 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
CHPT1-206ENST00000550385 INE1O15225 51 aa2.62□□□□□ -1.99
CHPT1-206ENST00000550385 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
CHPT1-206ENST00000550385 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
CHPT1-206ENST00000550385 KRTAP5-8O75690 187 aa2.58□□□□□ -2
CHPT1-206ENST00000550385 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
CHPT1-206ENST00000550385 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
CHPT1-206ENST00000550385 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
CHPT1-206ENST00000550385 PRM1P04553 51 aa2.2□□□□□ -2.06
CHPT1-206ENST00000550385 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
CHPT1-206ENST00000550385 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CHPT1-206ENST00000550385 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
CHPT1-206ENST00000550385 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
CHPT1-206ENST00000550385 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
CHPT1-206ENST00000550385 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms