RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 ETDBQ3ZM63 59 aa1.3□□□□□ -2.2
GNPTAB-207ENST00000550352 PLAC4Q8WY50 150 aa1.3□□□□□ -2.2
GNPTAB-207ENST00000550352 SPRR2FQ96RM1 72 aa1.3□□□□□ -2.2
GNPTAB-207ENST00000550352 H0Y9P7 68 aa1.29□□□□□ -2.2
GNPTAB-207ENST00000550352 HIST1H4AP62805 103 aaKnown RBP1.29□□□□□ -2.2
GNPTAB-207ENST00000550352 SPRR2EP22531 72 aa1.28□□□□□ -2.2
GNPTAB-207ENST00000550352 SPRR2BP35325 72 aa1.28□□□□□ -2.2
GNPTAB-207ENST00000550352 SPRR2AP35326 72 aa1.28□□□□□ -2.2
GNPTAB-207ENST00000550352 MT1XP80297 61 aa1.28□□□□□ -2.2
GNPTAB-207ENST00000550352 KRTAP8-1Q8IUC2 63 aa1.28□□□□□ -2.2
GNPTAB-207ENST00000550352 KRTAP2-1Q9BYU5 128 aa1.28□□□□□ -2.2
GNPTAB-207ENST00000550352 ATP5EP2Q5VTU8 51 aa1.27□□□□□ -2.21
GNPTAB-207ENST00000550352 C20orf197Q8N268 126 aa1.27□□□□□ -2.21
GNPTAB-207ENST00000550352 LINC00208Q96KT6 92 aa1.27□□□□□ -2.21
GNPTAB-207ENST00000550352 A0A1B0GV90 55 aa1.26□□□□□ -2.21
GNPTAB-207ENST00000550352 RPS28P62857 69 aaKnown RBP1.26□□□□□ -2.21
GNPTAB-207ENST00000550352 COA5Q86WW8 74 aa1.26□□□□□ -2.21
GNPTAB-207ENST00000550352 M0QZ58 72 aa1.25□□□□□ -2.21
GNPTAB-207ENST00000550352 LINC01554Q52M75 96 aa1.25□□□□□ -2.21
GNPTAB-207ENST00000550352 LINC00643Q86TS7 51 aa1.25□□□□□ -2.21
GNPTAB-207ENST00000550352 SPRR2DP22532 72 aa1.24□□□□□ -2.21
GNPTAB-207ENST00000550352 KTN1-AS1Q86SY8 53 aa1.24□□□□□ -2.21
GNPTAB-207ENST00000550352 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
GNPTAB-207ENST00000550352 MT-ATP8P03928 68 aa1.22□□□□□ -2.21
GNPTAB-207ENST00000550352 DMAC1Q96GE9 116 aa1.22□□□□□ -2.21
GNPTAB-207ENST00000550352 TRAV7A0A075B6U4 112 aa1.21□□□□□ -2.22
GNPTAB-207ENST00000550352 ACYP2P14621 99 aa1.21□□□□□ -2.22
GNPTAB-207ENST00000550352 SPTSSBQ8NFR3 76 aa1.21□□□□□ -2.22
GNPTAB-207ENST00000550352 J3QR89 54 aa1.2□□□□□ -2.22
GNPTAB-207ENST00000550352 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
GNPTAB-207ENST00000550352 CHKB-CPT1BH3BT56 60 aa1.19□□□□□ -2.22
GNPTAB-207ENST00000550352 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
GNPTAB-207ENST00000550352 TMEM258P61165 79 aa1.15□□□□□ -2.23
GNPTAB-207ENST00000550352 BRK1Q8WUW1 75 aa1.15□□□□□ -2.23
GNPTAB-207ENST00000550352 MT1EP04732 61 aa1.14□□□□□ -2.23
GNPTAB-207ENST00000550352 KRTAP19-7Q3SYF9 63 aa1.14□□□□□ -2.23
GNPTAB-207ENST00000550352 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
GNPTAB-207ENST00000550352 SNURFQ9Y675 71 aa1.14□□□□□ -2.23
GNPTAB-207ENST00000550352 SERP1Q9Y6X1 66 aa1.14□□□□□ -2.23
GNPTAB-207ENST00000550352 A0A0D9SG42 100 aa1.13□□□□□ -2.23
GNPTAB-207ENST00000550352 K7ERU9 68 aa1.13□□□□□ -2.23
GNPTAB-207ENST00000550352 CYSTM1Q9H1C7 97 aa1.13□□□□□ -2.23
GNPTAB-207ENST00000550352 MT1GP13640 62 aa1.12□□□□□ -2.23
GNPTAB-207ENST00000550352 CCDC179H3BU77 68 aa1.11□□□□□ -2.23
GNPTAB-207ENST00000550352 KRTAP19-5Q3LI72 72 aa1.11□□□□□ -2.23
GNPTAB-207ENST00000550352 MT4P47944 62 aa1.1□□□□□ -2.23
GNPTAB-207ENST00000550352 ROMO1P60602 79 aa1.1□□□□□ -2.23
GNPTAB-207ENST00000550352 SPATA8Q6RVD6 105 aa1.1□□□□□ -2.23
GNPTAB-207ENST00000550352 SERP2Q8N6R1 65 aa1.1□□□□□ -2.23
GNPTAB-207ENST00000550352 AHNAK2Q8IVF2 5795 aa1.09□□□□□ -2.23
GNPTAB-207ENST00000550352 MT1MQ8N339 61 aa1.09□□□□□ -2.23
GNPTAB-207ENST00000550352 TNP1P09430 55 aa1.07□□□□□ -2.24
GNPTAB-207ENST00000550352 MT1LQ93083 61 aa1.07□□□□□ -2.24
GNPTAB-207ENST00000550352 A0A1B0GU69 56 aa1.06□□□□□ -2.24
GNPTAB-207ENST00000550352 C10orf95Q9H7T3 257 aa1.06□□□□□ -2.24
GNPTAB-207ENST00000550352 COX7CP15954 63 aa1.05□□□□□ -2.24
GNPTAB-207ENST00000550352 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
GNPTAB-207ENST00000550352 H7BZZ5 65 aa1.04□□□□□ -2.24
GNPTAB-207ENST00000550352 Q1T7F1 81 aa1.03□□□□□ -2.24
GNPTAB-207ENST00000550352 PRR15LQ9BU68 103 aa1.02□□□□□ -2.25
GNPTAB-207ENST00000550352 MIR22HGQ0VDD5 57 aa1.01□□□□□ -2.25
GNPTAB-207ENST00000550352 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
GNPTAB-207ENST00000550352 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
GNPTAB-207ENST00000550352 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
GNPTAB-207ENST00000550352 UQCR11O14957 56 aa0.98□□□□□ -2.25
GNPTAB-207ENST00000550352 LINC01558Q9Y6Z2 57 aa0.98□□□□□ -2.25
GNPTAB-207ENST00000550352 ATP5EP56381 51 aaPredicted RBP0.97□□□□□ -2.25
GNPTAB-207ENST00000550352 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
GNPTAB-207ENST00000550352 AHNAKQ09666 5890 aaKnown RBP0.92□□□□□ -2.26
GNPTAB-207ENST00000550352 CDC42SE1Q9NRR8 79 aa0.92□□□□□ -2.26
GNPTAB-207ENST00000550352 MT1AP04731 61 aa0.91□□□□□ -2.26
GNPTAB-207ENST00000550352 KRTAP6-1Q3LI64 71 aa0.91□□□□□ -2.26
GNPTAB-207ENST00000550352 INE1O15225 51 aa0.9□□□□□ -2.27
GNPTAB-207ENST00000550352 KRTAP6-2Q3LI66 62 aa0.89□□□□□ -2.27
GNPTAB-207ENST00000550352 MUC5ACP98088 5654 aa0.88□□□□□ -2.27
GNPTAB-207ENST00000550352 PHGR1C9JFL3 82 aa0.62□□□□□ -2.31
GNPTAB-207ENST00000550352 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
GNPTAB-207ENST00000550352 PRM1P04553 51 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 128 ms