RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 LINC00643Q86TS7 51 aa1.52□□□□□ -2.17
HCFC2-204ENST00000550335 TRAV22A0A0B4J277 110 aa1.5□□□□□ -2.17
HCFC2-204ENST00000550335 ATOX1O00244 68 aa1.5□□□□□ -2.17
HCFC2-204ENST00000550335 CYP4F30PQ9H0H9 118 aa1.5□□□□□ -2.17
HCFC2-204ENST00000550335 KLKP1Q107X0 134 aa1.49□□□□□ -2.17
HCFC2-204ENST00000550335 KRTAP19-6Q3LI70 58 aa1.49□□□□□ -2.17
HCFC2-204ENST00000550335 S4R3F8 94 aa1.48□□□□□ -2.17
HCFC2-204ENST00000550335 H0YAA0 97 aa1.47□□□□□ -2.17
HCFC2-204ENST00000550335 CRIPTQ9P021 101 aa1.47□□□□□ -2.17
HCFC2-204ENST00000550335 SPRR2GQ9BYE4 73 aa1.46□□□□□ -2.18
HCFC2-204ENST00000550335 H0Y9P7 68 aa1.45□□□□□ -2.18
HCFC2-204ENST00000550335 NDUFC1O43677 76 aa1.45□□□□□ -2.18
HCFC2-204ENST00000550335 KRTAP19-8Q3LI54 63 aa1.45□□□□□ -2.18
HCFC2-204ENST00000550335 USH2AO75445 5202 aa1.45□□□□□ -2.18
HCFC2-204ENST00000550335 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
HCFC2-204ENST00000550335 SSPOA2VEC9 5147 aa1.44□□□□□ -2.18
HCFC2-204ENST00000550335 A0A087WVE0 104 aa1.44□□□□□ -2.18
HCFC2-204ENST00000550335 MT-ATP8P03928 68 aa1.44□□□□□ -2.18
HCFC2-204ENST00000550335 SERP2Q8N6R1 65 aa1.44□□□□□ -2.18
HCFC2-204ENST00000550335 SPTSSBQ8NFR3 76 aa1.44□□□□□ -2.18
HCFC2-204ENST00000550335 ATP5EP56381 51 aaPredicted RBP1.43□□□□□ -2.18
HCFC2-204ENST00000550335 Q5VV11 94 aa1.43□□□□□ -2.18
HCFC2-204ENST00000550335 C20orf197Q8N268 126 aa1.43□□□□□ -2.18
HCFC2-204ENST00000550335 FCGBPQ9Y6R7 5405 aaPredicted RBP1.43□□□□□ -2.18
HCFC2-204ENST00000550335 SYNE2Q8WXH0 6885 aaKnown RBP1.42□□□□□ -2.18
HCFC2-204ENST00000550335 MT1BP07438 61 aa1.42□□□□□ -2.18
HCFC2-204ENST00000550335 ACYP2P14621 99 aa1.39□□□□□ -2.19
HCFC2-204ENST00000550335 A0A0D9SG42 100 aa1.38□□□□□ -2.19
HCFC2-204ENST00000550335 M0QZ58 72 aa1.35□□□□□ -2.19
HCFC2-204ENST00000550335 SERP1Q9Y6X1 66 aa1.35□□□□□ -2.19
HCFC2-204ENST00000550335 H7BZZ5 65 aa1.34□□□□□ -2.19
HCFC2-204ENST00000550335 CHKB-CPT1BH3BT56 60 aa1.33□□□□□ -2.2
HCFC2-204ENST00000550335 MT1XP80297 61 aa1.33□□□□□ -2.2
HCFC2-204ENST00000550335 NEBP20929 6669 aa1.33□□□□□ -2.2
HCFC2-204ENST00000550335 PRR15LQ9BU68 103 aa1.32□□□□□ -2.2
HCFC2-204ENST00000550335 SPATA8Q6RVD6 105 aa1.3□□□□□ -2.2
HCFC2-204ENST00000550335 KRTAP8-1Q8IUC2 63 aa1.29□□□□□ -2.2
HCFC2-204ENST00000550335 KRTAP20-1Q3LI63 56 aa1.27□□□□□ -2.21
HCFC2-204ENST00000550335 SPRR2FQ96RM1 72 aa1.27□□□□□ -2.21
HCFC2-204ENST00000550335 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
HCFC2-204ENST00000550335 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
HCFC2-204ENST00000550335 KMT2DO14686 5537 aa1.26□□□□□ -2.21
HCFC2-204ENST00000550335 A0A1B0GU69 56 aa1.26□□□□□ -2.21
HCFC2-204ENST00000550335 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
HCFC2-204ENST00000550335 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
HCFC2-204ENST00000550335 SPRR2EP22531 72 aa1.25□□□□□ -2.21
HCFC2-204ENST00000550335 SPRR2BP35325 72 aa1.25□□□□□ -2.21
HCFC2-204ENST00000550335 SPRR2AP35326 72 aa1.25□□□□□ -2.21
HCFC2-204ENST00000550335 LINC01558Q9Y6Z2 57 aa1.25□□□□□ -2.21
HCFC2-204ENST00000550335 UQCR11O14957 56 aa1.24□□□□□ -2.21
HCFC2-204ENST00000550335 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
HCFC2-204ENST00000550335 MDN1Q9NU22 5596 aa1.22□□□□□ -2.21
HCFC2-204ENST00000550335 SPRR2DP22532 72 aa1.21□□□□□ -2.22
HCFC2-204ENST00000550335 KRTAP19-7Q3SYF9 63 aa1.2□□□□□ -2.22
HCFC2-204ENST00000550335 MT1EP04732 61 aa1.18□□□□□ -2.22
HCFC2-204ENST00000550335 TNP1P09430 55 aa1.18□□□□□ -2.22
HCFC2-204ENST00000550335 MT1GP13640 62 aa1.18□□□□□ -2.22
HCFC2-204ENST00000550335 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
HCFC2-204ENST00000550335 DSTQ03001 7570 aaKnown RBP1.16□□□□□ -2.22
HCFC2-204ENST00000550335 KRTAP19-5Q3LI72 72 aa1.15□□□□□ -2.23
HCFC2-204ENST00000550335 GPR98Q8WXG9 6306 aa1.14□□□□□ -2.23
HCFC2-204ENST00000550335 MT1LQ93083 61 aa1.13□□□□□ -2.23
HCFC2-204ENST00000550335 MT1MQ8N339 61 aa1.12□□□□□ -2.23
HCFC2-204ENST00000550335 MT4P47944 62 aa1.03□□□□□ -2.24
HCFC2-204ENST00000550335 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
HCFC2-204ENST00000550335 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
HCFC2-204ENST00000550335 MT1AP04731 61 aa0.98□□□□□ -2.25
HCFC2-204ENST00000550335 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
HCFC2-204ENST00000550335 SYNE1Q8NF91 8797 aaKnown RBP0.97□□□□□ -2.25
HCFC2-204ENST00000550335 AHNAK2Q8IVF2 5795 aa0.96□□□□□ -2.26
HCFC2-204ENST00000550335 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
HCFC2-204ENST00000550335 KRTAP6-2Q3LI66 62 aa0.9□□□□□ -2.27
HCFC2-204ENST00000550335 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
HCFC2-204ENST00000550335 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
HCFC2-204ENST00000550335 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
HCFC2-204ENST00000550335 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
HCFC2-204ENST00000550335 PHGR1C9JFL3 82 aa0.6□□□□□ -2.31
HCFC2-204ENST00000550335 PRM1P04553 51 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 136.9 ms