RNA–Protein interactions for RNA: ENST00000549940.5

GNPTAB-206, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-206ENST00000549940 KRTAP19-4Q3LI73 84 aa9.76□□□□□ -0.85
GNPTAB-206ENST00000549940 KRTAP9-7A8MTY7 169 aa9.75□□□□□ -0.85
GNPTAB-206ENST00000549940 MDN1Q9NU22 5596 aa9.74□□□□□ -0.85
GNPTAB-206ENST00000549940 MT1GP13640 62 aa9.68□□□□□ -0.86
GNPTAB-206ENST00000549940 LCE3CQ5T5A8 94 aa9.65□□□□□ -0.86
GNPTAB-206ENST00000549940 SPRR2EP22531 72 aa9.64□□□□□ -0.87
GNPTAB-206ENST00000549940 SPRR2BP35325 72 aa9.64□□□□□ -0.87
GNPTAB-206ENST00000549940 SPRR2AP35326 72 aa9.64□□□□□ -0.87
GNPTAB-206ENST00000549940 LCE1AQ5T7P2 110 aa9.64□□□□□ -0.87
GNPTAB-206ENST00000549940 LCE5AQ5TCM9 118 aa9.6□□□□□ -0.87
GNPTAB-206ENST00000549940 MT1MQ8N339 61 aa9.53□□□□□ -0.88
GNPTAB-206ENST00000549940 KRTAP4-7Q9BYR0 210 aa9.5□□□□□ -0.89
GNPTAB-206ENST00000549940 SPRR5A0A1B0GTR4 108 aa9.39□□□□□ -0.91
GNPTAB-206ENST00000549940 NEBP20929 6669 aa9.33□□□□□ -0.92
GNPTAB-206ENST00000549940 KRTAP4-3Q9BYR4 195 aa9.3□□□□□ -0.92
GNPTAB-206ENST00000549940 SPRR2DP22532 72 aa9.29□□□□□ -0.92
GNPTAB-206ENST00000549940 DSTQ03001 7570 aaKnown RBP9.14□□□□□ -0.95
GNPTAB-206ENST00000549940 LUZP6Q538Z0 58 aa9.11□□□□□ -0.95
GNPTAB-206ENST00000549940 KRTAP9-6A8MVA2 160 aa9.05□□□□□ -0.96
GNPTAB-206ENST00000549940 LOC100996750A0A140TA64 210 aa8.94□□□□□ -0.98
GNPTAB-206ENST00000549940 LCE3BQ5TA77 95 aa8.94□□□□□ -0.98
GNPTAB-206ENST00000549940 KRTAP2-3P0C7H8 128 aa8.76□□□□□ -1.01
GNPTAB-206ENST00000549940 KRTAP2-4Q9BYR9 128 aa8.76□□□□□ -1.01
GNPTAB-206ENST00000549940 NDUFAF8A1L188 74 aa8.66□□□□□ -1.02
GNPTAB-206ENST00000549940 KRTAP20-1Q3LI63 56 aa8.66□□□□□ -1.02
GNPTAB-206ENST00000549940 KRTAP5-5Q701N2 237 aaPredicted RBP8.57□□□□□ -1.04
GNPTAB-206ENST00000549940 KRTAP2-2Q9BYT5 123 aa8.57□□□□□ -1.04
GNPTAB-206ENST00000549940 KRTAP2-1Q9BYU5 128 aa8.57□□□□□ -1.04
GNPTAB-206ENST00000549940 MT1AP04731 61 aa8.4□□□□□ -1.07
GNPTAB-206ENST00000549940 KRTAP6-1Q3LI64 71 aa8.3□□□□□ -1.08
GNPTAB-206ENST00000549940 KRTAP5-4Q6L8H1 288 aa8.3□□□□□ -1.08
GNPTAB-206ENST00000549940 LCE4AQ5TA78 99 aa8.25□□□□□ -1.09
GNPTAB-206ENST00000549940 SYNE1Q8NF91 8797 aaKnown RBP8.16□□□□□ -1.1
GNPTAB-206ENST00000549940 KRTAP12-4P60329 112 aa8.12□□□□□ -1.11
GNPTAB-206ENST00000549940 MT4P47944 62 aa8.07□□□□□ -1.12
GNPTAB-206ENST00000549940 KRTAP4-9Q9BYQ8 210 aa8.02□□□□□ -1.13
GNPTAB-206ENST00000549940 KRTAP9-4Q9BYQ2 154 aa8□□□□□ -1.13
GNPTAB-206ENST00000549940 LCE1DQ5T752 114 aa7.94□□□□□ -1.14
GNPTAB-206ENST00000549940 KRTAP4-6Q9BYQ5 205 aa7.94□□□□□ -1.14
GNPTAB-206ENST00000549940 HMCN1Q96RW7 5635 aa7.88□□□□□ -1.15
GNPTAB-206ENST00000549940 KRTAP20-2Q3LI61 65 aa7.79□□□□□ -1.16
GNPTAB-206ENST00000549940 KRTAP6-2Q3LI66 62 aa7.7□□□□□ -1.18
GNPTAB-206ENST00000549940 MT3P25713 68 aa7.66□□□□□ -1.18
GNPTAB-206ENST00000549940 A0A0A0MQY5 61 aa7.6□□□□□ -1.19
GNPTAB-206ENST00000549940 KRTAP5-3Q6L8H2 238 aa7.48□□□□□ -1.21
GNPTAB-206ENST00000549940 KRTAP5-2Q701N4 177 aa7.48□□□□□ -1.21
GNPTAB-206ENST00000549940 H3BS24 57 aa7.38□□□□□ -1.23
GNPTAB-206ENST00000549940 LCE3DQ9BYE3 92 aa7.24□□□□□ -1.25
GNPTAB-206ENST00000549940 INE1O15225 51 aa7.16□□□□□ -1.26
GNPTAB-206ENST00000549940 AHNAK2Q8IVF2 5795 aa7.09□□□□□ -1.27
GNPTAB-206ENST00000549940 OBSCNQ5VST9 7968 aa7.04□□□□□ -1.28
GNPTAB-206ENST00000549940 LCE3EQ5T5B0 92 aa7.01□□□□□ -1.29
GNPTAB-206ENST00000549940 KRTAP4-11Q9BYQ6 195 aa6.81□□□□□ -1.32
GNPTAB-206ENST00000549940 LCE1EQ5T753 118 aa6.68□□□□□ -1.34
GNPTAB-206ENST00000549940 KRTAP5-10Q6L8G5 202 aa6.68□□□□□ -1.34
GNPTAB-206ENST00000549940 GPR98Q8WXG9 6306 aa6.57□□□□□ -1.36
GNPTAB-206ENST00000549940 KRTAP5-8O75690 187 aa6.53□□□□□ -1.36
GNPTAB-206ENST00000549940 KRTAP5-1Q6L8H4 278 aa6.5□□□□□ -1.37
GNPTAB-206ENST00000549940 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
GNPTAB-206ENST00000549940 LCE1BQ5T7P3 118 aa6.29□□□□□ -1.4
GNPTAB-206ENST00000549940 KRTAP5-7Q6L8G8 165 aa6.29□□□□□ -1.4
GNPTAB-206ENST00000549940 LCE1CQ5T751 118 aa6.21□□□□□ -1.42
GNPTAB-206ENST00000549940 KRTAP4-2Q9BYR5 136 aa6.2□□□□□ -1.42
GNPTAB-206ENST00000549940 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
GNPTAB-206ENST00000549940 PRM1P04553 51 aa6□□□□□ -1.45
GNPTAB-206ENST00000549940 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.78□□□□□ -1.48
GNPTAB-206ENST00000549940 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.5
GNPTAB-206ENST00000549940 KRTAP4-12Q9BQ66 201 aa5.62□□□□□ -1.51
GNPTAB-206ENST00000549940 KRTAP5-11Q6L8G4 156 aa5.5□□□□□ -1.53
GNPTAB-206ENST00000549940 AHNAKQ09666 5890 aaKnown RBP5.47□□□□□ -1.53
GNPTAB-206ENST00000549940 KRTAP21-2Q3LI59 83 aa5.43□□□□□ -1.54
GNPTAB-206ENST00000549940 LCE1FQ5T754 118 aa5.04□□□□□ -1.6
GNPTAB-206ENST00000549940 KRTAP4-4Q9BYR3 166 aa4.86□□□□□ -1.63
GNPTAB-206ENST00000549940 PHGR1C9JFL3 82 aa4.72□□□□□ -1.65
GNPTAB-206ENST00000549940 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
GNPTAB-206ENST00000549940 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.83
GNPTAB-206ENST00000549940 MUC16Q8WXI7 14507 aa3.03□□□□□ -1.92
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms