RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 KRTAP10-5P60370 271 aa2.97□□□□□ -1.93
NPAS3-207ENST00000549770 S4R3F8 94 aa2.97□□□□□ -1.93
NPAS3-207ENST00000549770 INE1O15225 51 aa2.93□□□□□ -1.94
NPAS3-207ENST00000549770 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
NPAS3-207ENST00000549770 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
NPAS3-207ENST00000549770 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
NPAS3-207ENST00000549770 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
NPAS3-207ENST00000549770 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
NPAS3-207ENST00000549770 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
NPAS3-207ENST00000549770 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
NPAS3-207ENST00000549770 MT1BP07438 61 aa2.85□□□□□ -1.95
NPAS3-207ENST00000549770 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
NPAS3-207ENST00000549770 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
NPAS3-207ENST00000549770 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
NPAS3-207ENST00000549770 R4GN34 69 aa2.83□□□□□ -1.96
NPAS3-207ENST00000549770 KRTAP19-8Q3LI54 63 aa2.82□□□□□ -1.96
NPAS3-207ENST00000549770 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
NPAS3-207ENST00000549770 SYNE2Q8WXH0 6885 aaKnown RBP2.79□□□□□ -1.96
NPAS3-207ENST00000549770 A0A0D9SG42 100 aa2.78□□□□□ -1.96
NPAS3-207ENST00000549770 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
NPAS3-207ENST00000549770 M0QZ58 72 aa2.76□□□□□ -1.97
NPAS3-207ENST00000549770 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
NPAS3-207ENST00000549770 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
NPAS3-207ENST00000549770 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
NPAS3-207ENST00000549770 KMT2DO14686 5537 aa2.69□□□□□ -1.98
NPAS3-207ENST00000549770 MT1XP80297 61 aa2.68□□□□□ -1.98
NPAS3-207ENST00000549770 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
NPAS3-207ENST00000549770 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
NPAS3-207ENST00000549770 NEBP20929 6669 aa2.62□□□□□ -1.99
NPAS3-207ENST00000549770 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
NPAS3-207ENST00000549770 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
NPAS3-207ENST00000549770 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
NPAS3-207ENST00000549770 SPRR2EP22531 72 aa2.56□□□□□ -2
NPAS3-207ENST00000549770 SPRR2BP35325 72 aa2.56□□□□□ -2
NPAS3-207ENST00000549770 SPRR2AP35326 72 aa2.56□□□□□ -2
NPAS3-207ENST00000549770 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
NPAS3-207ENST00000549770 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
NPAS3-207ENST00000549770 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
NPAS3-207ENST00000549770 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
NPAS3-207ENST00000549770 SPRR2DP22532 72 aa2.48□□□□□ -2.01
NPAS3-207ENST00000549770 TNP1P09430 55 aa2.45□□□□□ -2.02
NPAS3-207ENST00000549770 LCE3AQ5TA76 89 aa2.41□□□□□ -2.02
NPAS3-207ENST00000549770 KRTAP2-1Q9BYU5 128 aa2.41□□□□□ -2.02
NPAS3-207ENST00000549770 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
NPAS3-207ENST00000549770 MT1EP04732 61 aa2.37□□□□□ -2.03
NPAS3-207ENST00000549770 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
NPAS3-207ENST00000549770 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
NPAS3-207ENST00000549770 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
NPAS3-207ENST00000549770 MT1GP13640 62 aa2.27□□□□□ -2.05
NPAS3-207ENST00000549770 MT1LQ93083 61 aa2.27□□□□□ -2.05
NPAS3-207ENST00000549770 MT1MQ8N339 61 aa2.26□□□□□ -2.05
NPAS3-207ENST00000549770 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
NPAS3-207ENST00000549770 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
NPAS3-207ENST00000549770 MT4P47944 62 aa2.18□□□□□ -2.06
NPAS3-207ENST00000549770 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
NPAS3-207ENST00000549770 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
NPAS3-207ENST00000549770 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
NPAS3-207ENST00000549770 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
NPAS3-207ENST00000549770 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
NPAS3-207ENST00000549770 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
NPAS3-207ENST00000549770 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
NPAS3-207ENST00000549770 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
NPAS3-207ENST00000549770 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
NPAS3-207ENST00000549770 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
NPAS3-207ENST00000549770 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
NPAS3-207ENST00000549770 KRTAP6-1Q3LI64 71 aa1.93□□□□□ -2.1
NPAS3-207ENST00000549770 MT1AP04731 61 aa1.92□□□□□ -2.1
NPAS3-207ENST00000549770 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
NPAS3-207ENST00000549770 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
NPAS3-207ENST00000549770 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
NPAS3-207ENST00000549770 PRM1P04553 51 aa1.72□□□□□ -2.13
NPAS3-207ENST00000549770 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
NPAS3-207ENST00000549770 AHNAKQ09666 5890 aaKnown RBP1.71□□□□□ -2.14
NPAS3-207ENST00000549770 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
NPAS3-207ENST00000549770 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
NPAS3-207ENST00000549770 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
NPAS3-207ENST00000549770 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
NPAS3-207ENST00000549770 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 257.2 ms