RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 SPRR5A0A1B0GTR4 108 aa8.86□□□□□ -0.99
TGFBR1-207ENST00000549766 KRTAP5-9P26371 169 aa8.74□□□□□ -1.01
TGFBR1-207ENST00000549766 MT1LQ93083 61 aa8.74□□□□□ -1.01
TGFBR1-207ENST00000549766 KRTAP19-4Q3LI73 84 aa8.69□□□□□ -1.02
TGFBR1-207ENST00000549766 LCE3CQ5T5A8 94 aa8.68□□□□□ -1.02
TGFBR1-207ENST00000549766 MDN1Q9NU22 5596 aa8.62□□□□□ -1.03
TGFBR1-207ENST00000549766 SPRR2FQ96RM1 72 aa8.6□□□□□ -1.03
TGFBR1-207ENST00000549766 KRTAP2-3P0C7H8 128 aa8.53□□□□□ -1.04
TGFBR1-207ENST00000549766 KRTAP2-4Q9BYR9 128 aa8.53□□□□□ -1.04
TGFBR1-207ENST00000549766 KRTAP19-3Q7Z4W3 81 aa8.53□□□□□ -1.04
TGFBR1-207ENST00000549766 LUZP6Q538Z0 58 aa8.49□□□□□ -1.05
TGFBR1-207ENST00000549766 KRTAP4-7Q9BYR0 210 aa8.47□□□□□ -1.05
TGFBR1-207ENST00000549766 MT1GP13640 62 aa8.46□□□□□ -1.06
TGFBR1-207ENST00000549766 NDUFAF8A1L188 74 aa8.4□□□□□ -1.06
TGFBR1-207ENST00000549766 LCE5AQ5TCM9 118 aa8.38□□□□□ -1.07
TGFBR1-207ENST00000549766 SPRR2EP22531 72 aa8.37□□□□□ -1.07
TGFBR1-207ENST00000549766 SPRR2BP35325 72 aa8.37□□□□□ -1.07
TGFBR1-207ENST00000549766 SPRR2AP35326 72 aa8.37□□□□□ -1.07
TGFBR1-207ENST00000549766 MT1MQ8N339 61 aa8.37□□□□□ -1.07
TGFBR1-207ENST00000549766 LCE1AQ5T7P2 110 aa8.26□□□□□ -1.09
TGFBR1-207ENST00000549766 KRTAP9-6A8MVA2 160 aa8.25□□□□□ -1.09
TGFBR1-207ENST00000549766 KRTAP2-2Q9BYT5 123 aa8.23□□□□□ -1.09
TGFBR1-207ENST00000549766 KRTAP2-1Q9BYU5 128 aa8.23□□□□□ -1.09
TGFBR1-207ENST00000549766 KRTAP4-3Q9BYR4 195 aa8.21□□□□□ -1.1
TGFBR1-207ENST00000549766 SPRR2DP22532 72 aa8.09□□□□□ -1.11
TGFBR1-207ENST00000549766 LOC100996750A0A140TA64 210 aa7.95□□□□□ -1.14
TGFBR1-207ENST00000549766 LCE3BQ5TA77 95 aa7.91□□□□□ -1.14
TGFBR1-207ENST00000549766 DSTQ03001 7570 aaKnown RBP7.83□□□□□ -1.16
TGFBR1-207ENST00000549766 GPR98Q8WXG9 6306 aa7.8□□□□□ -1.16
TGFBR1-207ENST00000549766 KRTAP5-5Q701N2 237 aaPredicted RBP7.57□□□□□ -1.2
TGFBR1-207ENST00000549766 H3BS24 57 aa7.5□□□□□ -1.21
TGFBR1-207ENST00000549766 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
TGFBR1-207ENST00000549766 MT1AP04731 61 aa7.42□□□□□ -1.22
TGFBR1-207ENST00000549766 A0A0A0MQY5 61 aa7.36□□□□□ -1.23
TGFBR1-207ENST00000549766 KRTAP6-1Q3LI64 71 aa7.36□□□□□ -1.23
TGFBR1-207ENST00000549766 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
TGFBR1-207ENST00000549766 KRTAP5-4Q6L8H1 288 aa7.18□□□□□ -1.26
TGFBR1-207ENST00000549766 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
TGFBR1-207ENST00000549766 HMCN1Q96RW7 5635 aa7.13□□□□□ -1.27
TGFBR1-207ENST00000549766 SYNE1Q8NF91 8797 aaKnown RBP7.11□□□□□ -1.27
TGFBR1-207ENST00000549766 MT4P47944 62 aa7.1□□□□□ -1.27
TGFBR1-207ENST00000549766 AHNAK2Q8IVF2 5795 aa7.05□□□□□ -1.28
TGFBR1-207ENST00000549766 KRTAP9-4Q9BYQ2 154 aa7.04□□□□□ -1.28
TGFBR1-207ENST00000549766 KRTAP5-10Q6L8G5 202 aa6.96□□□□□ -1.29
TGFBR1-207ENST00000549766 INE1O15225 51 aa6.93□□□□□ -1.3
TGFBR1-207ENST00000549766 KRTAP12-4P60329 112 aa6.93□□□□□ -1.3
TGFBR1-207ENST00000549766 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
TGFBR1-207ENST00000549766 KRTAP5-7Q6L8G8 165 aa6.76□□□□□ -1.33
TGFBR1-207ENST00000549766 KRTAP6-2Q3LI66 62 aa6.74□□□□□ -1.33
TGFBR1-207ENST00000549766 KRTAP5-3Q6L8H2 238 aa6.71□□□□□ -1.34
TGFBR1-207ENST00000549766 MT3P25713 68 aa6.7□□□□□ -1.34
TGFBR1-207ENST00000549766 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
TGFBR1-207ENST00000549766 KRTAP5-2Q701N4 177 aa6.53□□□□□ -1.36
TGFBR1-207ENST00000549766 LCE3DQ9BYE3 92 aa6.52□□□□□ -1.37
TGFBR1-207ENST00000549766 LCE3EQ5T5B0 92 aa6.36□□□□□ -1.39
TGFBR1-207ENST00000549766 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
TGFBR1-207ENST00000549766 KRTAP4-11Q9BYQ6 195 aa6.09□□□□□ -1.43
TGFBR1-207ENST00000549766 AHNAKQ09666 5890 aaKnown RBP5.95□□□□□ -1.46
TGFBR1-207ENST00000549766 MUC5ACP98088 5654 aa5.91□□□□□ -1.46
TGFBR1-207ENST00000549766 KRTAP5-8O75690 187 aa5.89□□□□□ -1.47
TGFBR1-207ENST00000549766 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
TGFBR1-207ENST00000549766 LCE1EQ5T753 118 aa5.82□□□□□ -1.48
TGFBR1-207ENST00000549766 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
TGFBR1-207ENST00000549766 KRTAP5-1Q6L8H4 278 aa5.63□□□□□ -1.51
TGFBR1-207ENST00000549766 PRM1P04553 51 aa5.59□□□□□ -1.52
TGFBR1-207ENST00000549766 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
TGFBR1-207ENST00000549766 LCE1CQ5T751 118 aa5.43□□□□□ -1.54
TGFBR1-207ENST00000549766 LCE1BQ5T7P3 118 aa5.43□□□□□ -1.54
TGFBR1-207ENST00000549766 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.11□□□□□ -1.59
TGFBR1-207ENST00000549766 KRTAP21-2Q3LI59 83 aa4.83□□□□□ -1.64
TGFBR1-207ENST00000549766 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
TGFBR1-207ENST00000549766 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
TGFBR1-207ENST00000549766 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
TGFBR1-207ENST00000549766 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
TGFBR1-207ENST00000549766 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
TGFBR1-207ENST00000549766 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.83
TGFBR1-207ENST00000549766 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
TGFBR1-207ENST00000549766 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms