RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 R4GN34 69 aa2.14□□□□□ -2.07
APP-217ENST00000548570 MT1XP80297 61 aa2.12□□□□□ -2.07
APP-217ENST00000548570 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
APP-217ENST00000548570 CDC42SE1Q9NRR8 79 aa2.12□□□□□ -2.07
APP-217ENST00000548570 A0A1B0GU69 56 aa2.11□□□□□ -2.07
APP-217ENST00000548570 A8MU10 97 aa2.09□□□□□ -2.07
APP-217ENST00000548570 PRO2289Q9P1D8 64 aa2.09□□□□□ -2.07
APP-217ENST00000548570 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
APP-217ENST00000548570 A0A0D9SG42 100 aa2.07□□□□□ -2.08
APP-217ENST00000548570 KRTAP12-2P59991 146 aa2.07□□□□□ -2.08
APP-217ENST00000548570 KRTAP10-12P60413 245 aa2.07□□□□□ -2.08
APP-217ENST00000548570 PRR15LQ9BU68 103 aa2.07□□□□□ -2.08
APP-217ENST00000548570 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
APP-217ENST00000548570 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
APP-217ENST00000548570 PLAC4Q8WY50 150 aa2.05□□□□□ -2.08
APP-217ENST00000548570 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
APP-217ENST00000548570 KMT2DO14686 5537 aa2.04□□□□□ -2.08
APP-217ENST00000548570 UQCR11O14957 56 aa2.01□□□□□ -2.09
APP-217ENST00000548570 SYNE2Q8WXH0 6885 aaKnown RBP2.01□□□□□ -2.09
APP-217ENST00000548570 NEBP20929 6669 aa1.99□□□□□ -2.09
APP-217ENST00000548570 MACF1Q9UPN3 7388 aaKnown RBP1.99□□□□□ -2.09
APP-217ENST00000548570 C10orf95Q9H7T3 257 aa1.99□□□□□ -2.09
APP-217ENST00000548570 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
APP-217ENST00000548570 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
APP-217ENST00000548570 KRTAP6-3Q3LI67 103 aa1.95□□□□□ -2.1
APP-217ENST00000548570 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
APP-217ENST00000548570 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
APP-217ENST00000548570 INE1O15225 51 aa1.92□□□□□ -2.1
APP-217ENST00000548570 LCE3AQ5TA76 89 aa1.91□□□□□ -2.1
APP-217ENST00000548570 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
APP-217ENST00000548570 KRTAP19-7Q3SYF9 63 aa1.9□□□□□ -2.11
APP-217ENST00000548570 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
APP-217ENST00000548570 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
APP-217ENST00000548570 LCE3CQ5T5A8 94 aa1.87□□□□□ -2.11
APP-217ENST00000548570 MT1EP04732 61 aa1.86□□□□□ -2.11
APP-217ENST00000548570 TNP1P09430 55 aa1.86□□□□□ -2.11
APP-217ENST00000548570 KRTAP20-1Q3LI63 56 aa1.85□□□□□ -2.11
APP-217ENST00000548570 PP632Q6XCG6 107 aa1.82□□□□□ -2.12
APP-217ENST00000548570 SPRR2EP22531 72 aa1.81□□□□□ -2.12
APP-217ENST00000548570 SPRR2BP35325 72 aa1.81□□□□□ -2.12
APP-217ENST00000548570 SPRR2AP35326 72 aa1.81□□□□□ -2.12
APP-217ENST00000548570 MT1LQ93083 61 aa1.8□□□□□ -2.12
APP-217ENST00000548570 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
APP-217ENST00000548570 KRTAP19-3Q7Z4W3 81 aa1.79□□□□□ -2.12
APP-217ENST00000548570 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
APP-217ENST00000548570 MT1GP13640 62 aa1.75□□□□□ -2.13
APP-217ENST00000548570 MT1MQ8N339 61 aa1.75□□□□□ -2.13
APP-217ENST00000548570 SPRR2DP22532 72 aa1.74□□□□□ -2.13
APP-217ENST00000548570 KRTAP2-3P0C7H8 128 aa1.71□□□□□ -2.14
APP-217ENST00000548570 KRTAP2-4Q9BYR9 128 aa1.71□□□□□ -2.14
APP-217ENST00000548570 LCE3EQ5T5B0 92 aa1.69□□□□□ -2.14
APP-217ENST00000548570 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
APP-217ENST00000548570 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
APP-217ENST00000548570 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
APP-217ENST00000548570 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
APP-217ENST00000548570 SPRR5A0A1B0GTR4 108 aa1.67□□□□□ -2.14
APP-217ENST00000548570 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
APP-217ENST00000548570 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
APP-217ENST00000548570 DSTQ03001 7570 aaKnown RBP1.62□□□□□ -2.15
APP-217ENST00000548570 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.16
APP-217ENST00000548570 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
APP-217ENST00000548570 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
APP-217ENST00000548570 MT4P47944 62 aa1.53□□□□□ -2.16
APP-217ENST00000548570 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.16
APP-217ENST00000548570 MT1AP04731 61 aa1.51□□□□□ -2.17
APP-217ENST00000548570 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
APP-217ENST00000548570 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
APP-217ENST00000548570 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
APP-217ENST00000548570 KRTAP12-4P60329 112 aa1.45□□□□□ -2.18
APP-217ENST00000548570 KRTAP6-2Q3LI66 62 aa1.42□□□□□ -2.18
APP-217ENST00000548570 MUC5ACP98088 5654 aa1.42□□□□□ -2.18
APP-217ENST00000548570 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
APP-217ENST00000548570 LCE3DQ9BYE3 92 aa1.32□□□□□ -2.2
APP-217ENST00000548570 KRTAP21-2Q3LI59 83 aa1.19□□□□□ -2.22
APP-217ENST00000548570 PRM1P04553 51 aa0.97□□□□□ -2.25
APP-217ENST00000548570 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
APP-217ENST00000548570 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
APP-217ENST00000548570 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 41.9 ms