RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 KRTAP19-6Q3LI70 58 aa2.71□□□□□ -1.98
CASC18-202ENST00000548557 CRCT1Q9UGL9 99 aa2.69□□□□□ -1.98
CASC18-202ENST00000548557 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
CASC18-202ENST00000548557 KRTAP10-5P60370 271 aa2.68□□□□□ -1.98
CASC18-202ENST00000548557 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
CASC18-202ENST00000548557 MT1XP80297 61 aa2.66□□□□□ -1.98
CASC18-202ENST00000548557 MT3P25713 68 aa2.61□□□□□ -1.99
CASC18-202ENST00000548557 FCGBPQ9Y6R7 5405 aaPredicted RBP2.6□□□□□ -1.99
CASC18-202ENST00000548557 LCE3AQ5TA76 89 aa2.59□□□□□ -2
CASC18-202ENST00000548557 LCE1FQ5T754 118 aa2.56□□□□□ -2
CASC18-202ENST00000548557 KRTAP10-12P60413 245 aa2.54□□□□□ -2
CASC18-202ENST00000548557 KRTAP10-7P60409 375 aaPredicted RBP2.54□□□□□ -2
CASC18-202ENST00000548557 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
CASC18-202ENST00000548557 MACF1Q9UPN3 7388 aaKnown RBP2.5□□□□□ -2.01
CASC18-202ENST00000548557 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
CASC18-202ENST00000548557 KMT2DO14686 5537 aa2.44□□□□□ -2.02
CASC18-202ENST00000548557 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
CASC18-202ENST00000548557 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
CASC18-202ENST00000548557 LCE1EQ5T753 118 aa2.41□□□□□ -2.02
CASC18-202ENST00000548557 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
CASC18-202ENST00000548557 KRTAP19-7Q3SYF9 63 aa2.38□□□□□ -2.03
CASC18-202ENST00000548557 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
CASC18-202ENST00000548557 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
CASC18-202ENST00000548557 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
CASC18-202ENST00000548557 MT1EP04732 61 aa2.34□□□□□ -2.03
CASC18-202ENST00000548557 MUC12Q9UKN1 5478 aa2.31□□□□□ -2.04
CASC18-202ENST00000548557 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
CASC18-202ENST00000548557 SPRR2EP22531 72 aa2.29□□□□□ -2.04
CASC18-202ENST00000548557 SPRR2BP35325 72 aa2.29□□□□□ -2.04
CASC18-202ENST00000548557 SPRR2AP35326 72 aa2.29□□□□□ -2.04
CASC18-202ENST00000548557 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
CASC18-202ENST00000548557 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
CASC18-202ENST00000548557 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
CASC18-202ENST00000548557 MT1LQ93083 61 aa2.28□□□□□ -2.04
CASC18-202ENST00000548557 MT1GP13640 62 aa2.27□□□□□ -2.05
CASC18-202ENST00000548557 NEBP20929 6669 aa2.24□□□□□ -2.05
CASC18-202ENST00000548557 KRTAP9-6A8MVA2 160 aa2.24□□□□□ -2.05
CASC18-202ENST00000548557 MT1MQ8N339 61 aa2.21□□□□□ -2.06
CASC18-202ENST00000548557 SPRR2DP22532 72 aa2.21□□□□□ -2.06
CASC18-202ENST00000548557 LCE3EQ5T5B0 92 aa2.21□□□□□ -2.06
CASC18-202ENST00000548557 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
CASC18-202ENST00000548557 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
CASC18-202ENST00000548557 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
CASC18-202ENST00000548557 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
CASC18-202ENST00000548557 DSTQ03001 7570 aaKnown RBP2.13□□□□□ -2.07
CASC18-202ENST00000548557 KRTAP4-3Q9BYR4 195 aa2.13□□□□□ -2.07
CASC18-202ENST00000548557 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
CASC18-202ENST00000548557 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
CASC18-202ENST00000548557 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
CASC18-202ENST00000548557 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
CASC18-202ENST00000548557 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
CASC18-202ENST00000548557 MT1AP04731 61 aa1.95□□□□□ -2.1
CASC18-202ENST00000548557 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
CASC18-202ENST00000548557 MT4P47944 62 aa1.9□□□□□ -2.11
CASC18-202ENST00000548557 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
CASC18-202ENST00000548557 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
CASC18-202ENST00000548557 PRM1P04553 51 aa1.79□□□□□ -2.12
CASC18-202ENST00000548557 KRTAP6-2Q3LI66 62 aa1.78□□□□□ -2.12
CASC18-202ENST00000548557 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
CASC18-202ENST00000548557 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
CASC18-202ENST00000548557 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
CASC18-202ENST00000548557 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
CASC18-202ENST00000548557 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
CASC18-202ENST00000548557 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
CASC18-202ENST00000548557 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
CASC18-202ENST00000548557 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
CASC18-202ENST00000548557 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
CASC18-202ENST00000548557 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
CASC18-202ENST00000548557 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
CASC18-202ENST00000548557 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
CASC18-202ENST00000548557 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
CASC18-202ENST00000548557 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
CASC18-202ENST00000548557 MUC5ACP98088 5654 aa1.45□□□□□ -2.18
CASC18-202ENST00000548557 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
CASC18-202ENST00000548557 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
CASC18-202ENST00000548557 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
CASC18-202ENST00000548557 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 455.7 ms