RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SPINT4Q6UDR6 99 aa6.52□□□□□ -1.37
SSH1-208ENST00000548522 DSTQ03001 7570 aaKnown RBP6.51□□□□□ -1.37
SSH1-208ENST00000548522 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
SSH1-208ENST00000548522 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
SSH1-208ENST00000548522 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
SSH1-208ENST00000548522 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
SSH1-208ENST00000548522 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
SSH1-208ENST00000548522 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
SSH1-208ENST00000548522 KRTAP19-7Q3SYF9 63 aa6.22□□□□□ -1.41
SSH1-208ENST00000548522 MT1EP04732 61 aa6.18□□□□□ -1.42
SSH1-208ENST00000548522 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
SSH1-208ENST00000548522 KRTAP19-3Q7Z4W3 81 aa6.17□□□□□ -1.42
SSH1-208ENST00000548522 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
SSH1-208ENST00000548522 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
SSH1-208ENST00000548522 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
SSH1-208ENST00000548522 AHNAK2Q8IVF2 5795 aa6.09□□□□□ -1.43
SSH1-208ENST00000548522 TNP1P09430 55 aa6.07□□□□□ -1.44
SSH1-208ENST00000548522 MT4P47944 62 aa6.05□□□□□ -1.44
SSH1-208ENST00000548522 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
SSH1-208ENST00000548522 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
SSH1-208ENST00000548522 MT1GP13640 62 aa5.94□□□□□ -1.46
SSH1-208ENST00000548522 KRTAP5-10Q6L8G5 202 aa5.91□□□□□ -1.46
SSH1-208ENST00000548522 MT1MQ8N339 61 aa5.9□□□□□ -1.46
SSH1-208ENST00000548522 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
SSH1-208ENST00000548522 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
SSH1-208ENST00000548522 KRTAP5-4Q6L8H1 288 aa5.83□□□□□ -1.48
SSH1-208ENST00000548522 MT1LQ93083 61 aa5.83□□□□□ -1.48
SSH1-208ENST00000548522 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
SSH1-208ENST00000548522 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
SSH1-208ENST00000548522 KRTAP5-7Q6L8G8 165 aa5.7□□□□□ -1.5
SSH1-208ENST00000548522 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
SSH1-208ENST00000548522 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
SSH1-208ENST00000548522 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
SSH1-208ENST00000548522 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
SSH1-208ENST00000548522 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
SSH1-208ENST00000548522 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
SSH1-208ENST00000548522 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
SSH1-208ENST00000548522 SYNE1Q8NF91 8797 aaKnown RBP5.39□□□□□ -1.55
SSH1-208ENST00000548522 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
SSH1-208ENST00000548522 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
SSH1-208ENST00000548522 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
SSH1-208ENST00000548522 NDUFAF8A1L188 74 aa5.29□□□□□ -1.56
SSH1-208ENST00000548522 H3BS24 57 aa5.26□□□□□ -1.57
SSH1-208ENST00000548522 KRTAP4-12Q9BQ66 201 aa5.22□□□□□ -1.57
SSH1-208ENST00000548522 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
SSH1-208ENST00000548522 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
SSH1-208ENST00000548522 AHNAKQ09666 5890 aaKnown RBP5.12□□□□□ -1.59
SSH1-208ENST00000548522 MUC5ACP98088 5654 aa5.09□□□□□ -1.59
SSH1-208ENST00000548522 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
SSH1-208ENST00000548522 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
SSH1-208ENST00000548522 KRTAP5-8O75690 187 aa5□□□□□ -1.61
SSH1-208ENST00000548522 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
SSH1-208ENST00000548522 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
SSH1-208ENST00000548522 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
SSH1-208ENST00000548522 MT1AP04731 61 aa4.93□□□□□ -1.62
SSH1-208ENST00000548522 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
SSH1-208ENST00000548522 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
SSH1-208ENST00000548522 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
SSH1-208ENST00000548522 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
SSH1-208ENST00000548522 KRTAP5-1Q6L8H4 278 aa4.61□□□□□ -1.67
SSH1-208ENST00000548522 INE1O15225 51 aa4.55□□□□□ -1.68
SSH1-208ENST00000548522 MT3P25713 68 aa4.49□□□□□ -1.69
SSH1-208ENST00000548522 KRTAP4-2Q9BYR5 136 aa4.48□□□□□ -1.69
SSH1-208ENST00000548522 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
SSH1-208ENST00000548522 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
SSH1-208ENST00000548522 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
SSH1-208ENST00000548522 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
SSH1-208ENST00000548522 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
SSH1-208ENST00000548522 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
SSH1-208ENST00000548522 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
SSH1-208ENST00000548522 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
SSH1-208ENST00000548522 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
SSH1-208ENST00000548522 PRM1P04553 51 aa3.39□□□□□ -1.87
SSH1-208ENST00000548522 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
SSH1-208ENST00000548522 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
SSH1-208ENST00000548522 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
SSH1-208ENST00000548522 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
SSH1-208ENST00000548522 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 131.9 ms