RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 TNP1P09430 55 aa6.71□□□□□ -1.34
GATC-202ENST00000548171 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
GATC-202ENST00000548171 KRTAP5-5Q701N2 237 aaPredicted RBP6.63□□□□□ -1.35
GATC-202ENST00000548171 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
GATC-202ENST00000548171 KRTAP12-4P60329 112 aa6.61□□□□□ -1.35
GATC-202ENST00000548171 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
GATC-202ENST00000548171 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
GATC-202ENST00000548171 A8MU10 97 aa6.51□□□□□ -1.37
GATC-202ENST00000548171 K7ERU9 68 aa6.51□□□□□ -1.37
GATC-202ENST00000548171 A0A1B0GU69 56 aa6.45□□□□□ -1.38
GATC-202ENST00000548171 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
GATC-202ENST00000548171 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
GATC-202ENST00000548171 H7BZZ5 65 aa6.26□□□□□ -1.41
GATC-202ENST00000548171 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
GATC-202ENST00000548171 COX7CP15954 63 aa6.22□□□□□ -1.41
GATC-202ENST00000548171 KRTAP5-2Q701N4 177 aa6.16□□□□□ -1.42
GATC-202ENST00000548171 PRR15LQ9BU68 103 aa6.14□□□□□ -1.43
GATC-202ENST00000548171 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
GATC-202ENST00000548171 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
GATC-202ENST00000548171 MUC5ACP98088 5654 aa6.06□□□□□ -1.44
GATC-202ENST00000548171 AHNAKQ09666 5890 aaKnown RBP6.05□□□□□ -1.44
GATC-202ENST00000548171 MT1AP04731 61 aa6.03□□□□□ -1.44
GATC-202ENST00000548171 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
GATC-202ENST00000548171 LCE3CQ5T5A8 94 aa5.99□□□□□ -1.45
GATC-202ENST00000548171 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
GATC-202ENST00000548171 SVIPQ8NHG7 77 aa5.96□□□□□ -1.46
GATC-202ENST00000548171 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
GATC-202ENST00000548171 MUC5BQ9HC84 5762 aaPredicted RBP5.91□□□□□ -1.46
GATC-202ENST00000548171 UQCR11O14957 56 aa5.9□□□□□ -1.46
GATC-202ENST00000548171 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
GATC-202ENST00000548171 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
GATC-202ENST00000548171 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
GATC-202ENST00000548171 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
GATC-202ENST00000548171 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
GATC-202ENST00000548171 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
GATC-202ENST00000548171 K7ERS5 55 aa5.74□□□□□ -1.49
GATC-202ENST00000548171 ANAPC13Q9BS18 74 aa5.71□□□□□ -1.5
GATC-202ENST00000548171 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
GATC-202ENST00000548171 KRTAP4-12Q9BQ66 201 aa5.69□□□□□ -1.5
GATC-202ENST00000548171 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
GATC-202ENST00000548171 KRTAP5-1Q6L8H4 278 aa5.6□□□□□ -1.51
GATC-202ENST00000548171 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
GATC-202ENST00000548171 MT3P25713 68 aa5.55□□□□□ -1.52
GATC-202ENST00000548171 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
GATC-202ENST00000548171 TMEM258P61165 79 aa5.4□□□□□ -1.54
GATC-202ENST00000548171 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
GATC-202ENST00000548171 Q1T7F1 81 aa5.3□□□□□ -1.56
GATC-202ENST00000548171 PSPHP1O15172 72 aa5.28□□□□□ -1.56
GATC-202ENST00000548171 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
GATC-202ENST00000548171 V9GYY9 64 aa5.25□□□□□ -1.57
GATC-202ENST00000548171 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
GATC-202ENST00000548171 ROMO1P60602 79 aa5.21□□□□□ -1.58
GATC-202ENST00000548171 A6NED7 52 aa5.09□□□□□ -1.59
GATC-202ENST00000548171 H3BS24 57 aa4.97□□□□□ -1.61
GATC-202ENST00000548171 LCE1BQ5T7P3 118 aa4.91□□□□□ -1.62
GATC-202ENST00000548171 PCP4P48539 62 aa4.84□□□□□ -1.63
GATC-202ENST00000548171 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
GATC-202ENST00000548171 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
GATC-202ENST00000548171 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
GATC-202ENST00000548171 KRTAP5-11Q6L8G4 156 aa4.45□□□□□ -1.7
GATC-202ENST00000548171 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.36□□□□□ -1.71
GATC-202ENST00000548171 LCE3DQ9BYE3 92 aa4.23□□□□□ -1.73
GATC-202ENST00000548171 PHGR1C9JFL3 82 aa4.22□□□□□ -1.73
GATC-202ENST00000548171 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
GATC-202ENST00000548171 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.78
GATC-202ENST00000548171 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
GATC-202ENST00000548171 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
GATC-202ENST00000548171 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
GATC-202ENST00000548171 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
GATC-202ENST00000548171 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
GATC-202ENST00000548171 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
GATC-202ENST00000548171 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
GATC-202ENST00000548171 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
GATC-202ENST00000548171 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
GATC-202ENST00000548171 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
GATC-202ENST00000548171 PRM1P04553 51 aa2.62□□□□□ -1.99
GATC-202ENST00000548171 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
GATC-202ENST00000548171 INE1O15225 51 aa2.3□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms