RNA–Protein interactions for RNA: ENST00000548021.5

CNOT2-208, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-208ENST00000548021 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
CNOT2-208ENST00000548021 USH2AO75445 5202 aa3.33□□□□□ -1.88
CNOT2-208ENST00000548021 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
CNOT2-208ENST00000548021 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
CNOT2-208ENST00000548021 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
CNOT2-208ENST00000548021 SSPOA2VEC9 5147 aa3.23□□□□□ -1.89
CNOT2-208ENST00000548021 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
CNOT2-208ENST00000548021 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
CNOT2-208ENST00000548021 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
CNOT2-208ENST00000548021 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
CNOT2-208ENST00000548021 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
CNOT2-208ENST00000548021 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
CNOT2-208ENST00000548021 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
CNOT2-208ENST00000548021 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
CNOT2-208ENST00000548021 KMT2DO14686 5537 aa3.08□□□□□ -1.92
CNOT2-208ENST00000548021 MT1EP04732 61 aa3.06□□□□□ -1.92
CNOT2-208ENST00000548021 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
CNOT2-208ENST00000548021 MT1LQ93083 61 aa3.02□□□□□ -1.93
CNOT2-208ENST00000548021 FCGBPQ9Y6R7 5405 aaPredicted RBP3.01□□□□□ -1.93
CNOT2-208ENST00000548021 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
CNOT2-208ENST00000548021 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
CNOT2-208ENST00000548021 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
CNOT2-208ENST00000548021 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
CNOT2-208ENST00000548021 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
CNOT2-208ENST00000548021 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CNOT2-208ENST00000548021 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
CNOT2-208ENST00000548021 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
CNOT2-208ENST00000548021 MT3P25713 68 aa2.88□□□□□ -1.95
CNOT2-208ENST00000548021 MT1MQ8N339 61 aa2.87□□□□□ -1.95
CNOT2-208ENST00000548021 SPRR2FQ96RM1 72 aa2.86□□□□□ -1.95
CNOT2-208ENST00000548021 MT1GP13640 62 aa2.85□□□□□ -1.95
CNOT2-208ENST00000548021 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
CNOT2-208ENST00000548021 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
CNOT2-208ENST00000548021 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
CNOT2-208ENST00000548021 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
CNOT2-208ENST00000548021 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
CNOT2-208ENST00000548021 MACF1Q9UPN3 7388 aaKnown RBP2.74□□□□□ -1.97
CNOT2-208ENST00000548021 SPRR2EP22531 72 aa2.68□□□□□ -1.98
CNOT2-208ENST00000548021 SPRR2BP35325 72 aa2.68□□□□□ -1.98
CNOT2-208ENST00000548021 SPRR2AP35326 72 aa2.68□□□□□ -1.98
CNOT2-208ENST00000548021 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
CNOT2-208ENST00000548021 SYNE2Q8WXH0 6885 aaKnown RBP2.64□□□□□ -1.99
CNOT2-208ENST00000548021 INE1O15225 51 aa2.61□□□□□ -1.99
CNOT2-208ENST00000548021 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
CNOT2-208ENST00000548021 SPRR2DP22532 72 aa2.58□□□□□ -2
CNOT2-208ENST00000548021 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
CNOT2-208ENST00000548021 MT1AP04731 61 aa2.56□□□□□ -2
CNOT2-208ENST00000548021 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
CNOT2-208ENST00000548021 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
CNOT2-208ENST00000548021 DSTQ03001 7570 aaKnown RBP2.46□□□□□ -2.02
CNOT2-208ENST00000548021 NEBP20929 6669 aa2.44□□□□□ -2.02
CNOT2-208ENST00000548021 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
CNOT2-208ENST00000548021 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
CNOT2-208ENST00000548021 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
CNOT2-208ENST00000548021 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
CNOT2-208ENST00000548021 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
CNOT2-208ENST00000548021 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
CNOT2-208ENST00000548021 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
CNOT2-208ENST00000548021 MT4P47944 62 aa2.23□□□□□ -2.05
CNOT2-208ENST00000548021 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
CNOT2-208ENST00000548021 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
CNOT2-208ENST00000548021 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
CNOT2-208ENST00000548021 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
CNOT2-208ENST00000548021 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CNOT2-208ENST00000548021 LCE1BQ5T7P3 118 aa2.06□□□□□ -2.08
CNOT2-208ENST00000548021 PRM1P04553 51 aa2.05□□□□□ -2.08
CNOT2-208ENST00000548021 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
CNOT2-208ENST00000548021 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
CNOT2-208ENST00000548021 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
CNOT2-208ENST00000548021 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
CNOT2-208ENST00000548021 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
CNOT2-208ENST00000548021 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CNOT2-208ENST00000548021 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
CNOT2-208ENST00000548021 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
CNOT2-208ENST00000548021 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
CNOT2-208ENST00000548021 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
CNOT2-208ENST00000548021 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
CNOT2-208ENST00000548021 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 63.1 ms