RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
CCDC65-203ENST00000547861 MACF1Q9UPN3 7388 aaKnown RBP3.55□□□□□ -1.84
CCDC65-203ENST00000547861 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
CCDC65-203ENST00000547861 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
CCDC65-203ENST00000547861 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
CCDC65-203ENST00000547861 KRTAP19-6Q3LI70 58 aa3.5□□□□□ -1.85
CCDC65-203ENST00000547861 INE1O15225 51 aa3.47□□□□□ -1.85
CCDC65-203ENST00000547861 KRTAP19-8Q3LI54 63 aa3.44□□□□□ -1.86
CCDC65-203ENST00000547861 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
CCDC65-203ENST00000547861 MT1BP07438 61 aa3.4□□□□□ -1.87
CCDC65-203ENST00000547861 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
CCDC65-203ENST00000547861 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
CCDC65-203ENST00000547861 NEBP20929 6669 aa3.36□□□□□ -1.87
CCDC65-203ENST00000547861 TNP1P09430 55 aa3.36□□□□□ -1.87
CCDC65-203ENST00000547861 MT1XP80297 61 aa3.32□□□□□ -1.88
CCDC65-203ENST00000547861 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
CCDC65-203ENST00000547861 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
CCDC65-203ENST00000547861 KRTAP5-4Q6L8H1 288 aa3.31□□□□□ -1.88
CCDC65-203ENST00000547861 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
CCDC65-203ENST00000547861 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
CCDC65-203ENST00000547861 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
CCDC65-203ENST00000547861 MT3P25713 68 aa3.26□□□□□ -1.89
CCDC65-203ENST00000547861 KMT2DO14686 5537 aa3.25□□□□□ -1.89
CCDC65-203ENST00000547861 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
CCDC65-203ENST00000547861 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
CCDC65-203ENST00000547861 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
CCDC65-203ENST00000547861 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
CCDC65-203ENST00000547861 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
CCDC65-203ENST00000547861 SPRR5A0A1B0GTR4 108 aa3.11□□□□□ -1.91
CCDC65-203ENST00000547861 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
CCDC65-203ENST00000547861 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
CCDC65-203ENST00000547861 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
CCDC65-203ENST00000547861 SPRR2EP22531 72 aa3.07□□□□□ -1.92
CCDC65-203ENST00000547861 SPRR2BP35325 72 aa3.07□□□□□ -1.92
CCDC65-203ENST00000547861 SPRR2AP35326 72 aa3.07□□□□□ -1.92
CCDC65-203ENST00000547861 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
CCDC65-203ENST00000547861 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
CCDC65-203ENST00000547861 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
CCDC65-203ENST00000547861 KRTAP2-1Q9BYU5 128 aa2.99□□□□□ -1.93
CCDC65-203ENST00000547861 SPRR2DP22532 72 aa2.97□□□□□ -1.93
CCDC65-203ENST00000547861 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
CCDC65-203ENST00000547861 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
CCDC65-203ENST00000547861 MT1EP04732 61 aa2.9□□□□□ -1.95
CCDC65-203ENST00000547861 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
CCDC65-203ENST00000547861 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CCDC65-203ENST00000547861 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
CCDC65-203ENST00000547861 MT1LQ93083 61 aa2.86□□□□□ -1.95
CCDC65-203ENST00000547861 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
CCDC65-203ENST00000547861 DSTQ03001 7570 aaKnown RBP2.79□□□□□ -1.96
CCDC65-203ENST00000547861 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
CCDC65-203ENST00000547861 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
CCDC65-203ENST00000547861 MT1MQ8N339 61 aa2.73□□□□□ -1.97
CCDC65-203ENST00000547861 MT1GP13640 62 aa2.71□□□□□ -1.98
CCDC65-203ENST00000547861 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.98
CCDC65-203ENST00000547861 MT4P47944 62 aa2.62□□□□□ -1.99
CCDC65-203ENST00000547861 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
CCDC65-203ENST00000547861 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
CCDC65-203ENST00000547861 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
CCDC65-203ENST00000547861 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
CCDC65-203ENST00000547861 MT1AP04731 61 aa2.42□□□□□ -2.02
CCDC65-203ENST00000547861 KRTAP6-1Q3LI64 71 aa2.42□□□□□ -2.02
CCDC65-203ENST00000547861 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
CCDC65-203ENST00000547861 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
CCDC65-203ENST00000547861 SYNE1Q8NF91 8797 aaKnown RBP2.35□□□□□ -2.03
CCDC65-203ENST00000547861 LCE1CQ5T751 118 aa2.35□□□□□ -2.03
CCDC65-203ENST00000547861 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
CCDC65-203ENST00000547861 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
CCDC65-203ENST00000547861 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
CCDC65-203ENST00000547861 MUC5BQ9HC84 5762 aaPredicted RBP2.22□□□□□ -2.05
CCDC65-203ENST00000547861 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
CCDC65-203ENST00000547861 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
CCDC65-203ENST00000547861 LCE3DQ9BYE3 92 aa2.17□□□□□ -2.06
CCDC65-203ENST00000547861 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
CCDC65-203ENST00000547861 PRM1P04553 51 aa1.94□□□□□ -2.1
CCDC65-203ENST00000547861 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CCDC65-203ENST00000547861 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
CCDC65-203ENST00000547861 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.18
CCDC65-203ENST00000547861 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 51.1 ms