RNA–Protein interactions for RNA: ENST00000547465.1

CASC18-201, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best)

Gene CASC18, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-201ENST00000547465 H0YAA0 97 aa1.33□□□□□ -2.2
CASC18-201ENST00000547465 H0YGX0 51 aa1.33□□□□□ -2.2
CASC18-201ENST00000547465 WFDC13Q8IUB5 93 aa1.33□□□□□ -2.2
CASC18-201ENST00000547465 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
CASC18-201ENST00000547465 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
CASC18-201ENST00000547465 LCE1BQ5T7P3 118 aa1.32□□□□□ -2.2
CASC18-201ENST00000547465 LPAP08519 4548 aa1.32□□□□□ -2.2
CASC18-201ENST00000547465 HMCN1Q96RW7 5635 aa1.32□□□□□ -2.2
CASC18-201ENST00000547465 A0A096LNI7 61 aa1.31□□□□□ -2.2
CASC18-201ENST00000547465 C6orf48Q9UBA6 75 aa1.31□□□□□ -2.2
CASC18-201ENST00000547465 NDUFA1O15239 70 aa1.3□□□□□ -2.2
CASC18-201ENST00000547465 SMR3BP02814 79 aaPredicted RBP1.29□□□□□ -2.2
CASC18-201ENST00000547465 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
CASC18-201ENST00000547465 LINC00308Q8TCZ7 52 aa1.29□□□□□ -2.2
CASC18-201ENST00000547465 TOMM7Q9P0U1 55 aa1.29□□□□□ -2.2
CASC18-201ENST00000547465 MUC12Q9UKN1 5478 aa1.29□□□□□ -2.2
CASC18-201ENST00000547465 MACF1Q9UPN3 7388 aaKnown RBP1.28□□□□□ -2.2
CASC18-201ENST00000547465 MUC17Q685J3 4493 aa1.28□□□□□ -2.2
CASC18-201ENST00000547465 KMT2DO14686 5537 aa1.27□□□□□ -2.21
CASC18-201ENST00000547465 MT1HL1P0DM35 61 aa1.26□□□□□ -2.21
CASC18-201ENST00000547465 SPINK6Q6UWN8 80 aa1.25□□□□□ -2.21
CASC18-201ENST00000547465 PRLHP81277 87 aa1.24□□□□□ -2.21
CASC18-201ENST00000547465 MDN1Q9NU22 5596 aa1.21□□□□□ -2.22
CASC18-201ENST00000547465 IGLV5-48A0A075B6I7 105 aa1.2□□□□□ -2.22
CASC18-201ENST00000547465 RPS29P62273 56 aaKnown RBP1.19□□□□□ -2.22
CASC18-201ENST00000547465 SPINK1P00995 79 aa1.17□□□□□ -2.22
CASC18-201ENST00000547465 KRTAP2-3P0C7H8 128 aa1.16□□□□□ -2.22
CASC18-201ENST00000547465 KRTAP2-4Q9BYR9 128 aa1.16□□□□□ -2.22
CASC18-201ENST00000547465 AHNAK2Q8IVF2 5795 aa1.15□□□□□ -2.23
CASC18-201ENST00000547465 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
CASC18-201ENST00000547465 FLGP20930 4061 aaPredicted RBP1.13□□□□□ -2.23
CASC18-201ENST00000547465 DSTQ03001 7570 aaKnown RBP1.12□□□□□ -2.23
CASC18-201ENST00000547465 C9orf92A6NGG3 77 aa1.11□□□□□ -2.23
CASC18-201ENST00000547465 KRTAP4-1Q9BYQ7 146 aa1.11□□□□□ -2.23
CASC18-201ENST00000547465 MMP24-AS1A0A0U1RRL7 71 aa1.1□□□□□ -2.23
CASC18-201ENST00000547465 KRTAP19-2Q3LHN2 52 aa1.1□□□□□ -2.23
CASC18-201ENST00000547465 KRTAP2-1Q9BYU5 128 aa1.1□□□□□ -2.23
CASC18-201ENST00000547465 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.24
CASC18-201ENST00000547465 MT1HP80294 61 aa1.07□□□□□ -2.24
CASC18-201ENST00000547465 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
CASC18-201ENST00000547465 KRTAP19-3Q7Z4W3 81 aa1.06□□□□□ -2.24
CASC18-201ENST00000547465 S4R3F8 94 aa1.06□□□□□ -2.24
CASC18-201ENST00000547465 KRTAP5-10Q6L8G5 202 aa1.04□□□□□ -2.24
CASC18-201ENST00000547465 KRTAP19-6Q3LI70 58 aa1.02□□□□□ -2.25
CASC18-201ENST00000547465 KRTAP21-2Q3LI59 83 aa1.01□□□□□ -2.25
CASC18-201ENST00000547465 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
CASC18-201ENST00000547465 M0R2T5 61 aa1□□□□□ -2.25
CASC18-201ENST00000547465 MT2AP02795 61 aa1□□□□□ -2.25
CASC18-201ENST00000547465 MT1FP04733 61 aa1□□□□□ -2.25
CASC18-201ENST00000547465 SPRR2EP22531 72 aa0.95□□□□□ -2.26
CASC18-201ENST00000547465 SPRR2BP35325 72 aa0.95□□□□□ -2.26
CASC18-201ENST00000547465 SPRR2AP35326 72 aa0.95□□□□□ -2.26
CASC18-201ENST00000547465 SPRR2GQ9BYE4 73 aa0.94□□□□□ -2.26
CASC18-201ENST00000547465 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
CASC18-201ENST00000547465 MT1BP07438 61 aa0.93□□□□□ -2.26
CASC18-201ENST00000547465 KRTAP19-8Q3LI54 63 aa0.93□□□□□ -2.26
CASC18-201ENST00000547465 SPRR2DP22532 72 aa0.92□□□□□ -2.26
CASC18-201ENST00000547465 M0QZ58 72 aa0.88□□□□□ -2.27
CASC18-201ENST00000547465 MT1XP80297 61 aa0.88□□□□□ -2.27
CASC18-201ENST00000547465 SPRR2FQ96RM1 72 aa0.88□□□□□ -2.27
CASC18-201ENST00000547465 PRM1P04553 51 aa0.87□□□□□ -2.27
CASC18-201ENST00000547465 MT4P47944 62 aa0.84□□□□□ -2.27
CASC18-201ENST00000547465 KRTAP8-1Q8IUC2 63 aa0.81□□□□□ -2.28
CASC18-201ENST00000547465 KRTAP19-7Q3SYF9 63 aa0.79□□□□□ -2.28
CASC18-201ENST00000547465 MT1EP04732 61 aa0.78□□□□□ -2.28
CASC18-201ENST00000547465 TNP1P09430 55 aa0.76□□□□□ -2.29
CASC18-201ENST00000547465 KRTAP19-5Q3LI72 72 aa0.75□□□□□ -2.29
CASC18-201ENST00000547465 SYNE1Q8NF91 8797 aaKnown RBP0.74□□□□□ -2.29
CASC18-201ENST00000547465 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
CASC18-201ENST00000547465 MT1LQ93083 61 aa0.74□□□□□ -2.29
CASC18-201ENST00000547465 MT1GP13640 62 aa0.73□□□□□ -2.29
CASC18-201ENST00000547465 MT1MQ8N339 61 aa0.73□□□□□ -2.29
CASC18-201ENST00000547465 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
CASC18-201ENST00000547465 MT1AP04731 61 aa0.64□□□□□ -2.31
CASC18-201ENST00000547465 KRTAP6-1Q3LI64 71 aa0.62□□□□□ -2.31
CASC18-201ENST00000547465 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
CASC18-201ENST00000547465 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
CASC18-201ENST00000547465 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 45.2 ms