RNA–Protein interactions for RNA: ENST00000547465.1

CASC18-201, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best)

Gene CASC18, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-201ENST00000547465 AEBP2Q6ZN18 517 aaPredicted RBP12.52□□□□□ -0.41
CASC18-201ENST00000547465 CHIC1Q5VXU3 224 aa11.86□□□□□ -0.51
CASC18-201ENST00000547465 POTEDQ86YR6 584 aa10.88□□□□□ -0.67
CASC18-201ENST00000547465 SENP3Q9H4L4 574 aaPredicted RBP10.72□□□□□ -0.69
CASC18-201ENST00000547465 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
CASC18-201ENST00000547465 FOXD1Q16676 465 aa10.15□□□□□ -0.78
CASC18-201ENST00000547465 EHMT2Q96KQ7 1210 aa10.15□□□□□ -0.78
CASC18-201ENST00000547465 PLPPR3Q6T4P5 718 aa10.02□□□□□ -0.81
CASC18-201ENST00000547465 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
CASC18-201ENST00000547465 MSH5O43196 834 aa9.72□□□□□ -0.85
CASC18-201ENST00000547465 KCNA4P22459 653 aa9.71□□□□□ -0.86
CASC18-201ENST00000547465 CSRNP3Q8WYN3 585 aa9.59□□□□□ -0.87
CASC18-201ENST00000547465 SLC4A1APQ9BWU0 796 aaKnown RBP9.41□□□□□ -0.9
CASC18-201ENST00000547465 RTN4Q9NQC3 1192 aaKnown RBP9.38□□□□□ -0.91
CASC18-201ENST00000547465 ADRA2BP18089 450 aa9.36□□□□□ -0.91
CASC18-201ENST00000547465 AMER1Q5JTC6 1135 aaPredicted RBP9.36□□□□□ -0.91
CASC18-201ENST00000547465 PIAS4Q8N2W9 510 aaPredicted RBP9.32□□□□□ -0.92
CASC18-201ENST00000547465 PPP6R1Q9UPN7 881 aa9.01□□□□□ -0.97
CASC18-201ENST00000547465 NCBP3Q53F19 620 aaKnown RBP8.96□□□□□ -0.98
CASC18-201ENST00000547465 PPP4R3CPQ6ZMV5 832 aa8.94□□□□□ -0.98
CASC18-201ENST00000547465 ZBTB22O15209 634 aa8.93□□□□□ -0.98
CASC18-201ENST00000547465 CACNB1Q02641 598 aaPredicted RBP8.9□□□□□ -0.98
CASC18-201ENST00000547465 NPM3O75607 178 aaKnown RBP8.82□□□□□ -1
CASC18-201ENST00000547465 FOXD4L1Q9NU39 408 aa8.68□□□□□ -1.02
CASC18-201ENST00000547465 PRKCSHP14314 528 aaPredicted RBP8.66□□□□□ -1.02
CASC18-201ENST00000547465 FKBP8Q14318 412 aa8.64□□□□□ -1.03
CASC18-201ENST00000547465 BCANQ96GW7 911 aa8.6□□□□□ -1.03
CASC18-201ENST00000547465 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
CASC18-201ENST00000547465 TAOK2Q9UL54 1235 aa8.57□□□□□ -1.04
CASC18-201ENST00000547465 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
CASC18-201ENST00000547465 HAP1P54257 671 aaPredicted RBP8.5□□□□□ -1.05
CASC18-201ENST00000547465 CNKSR2Q8WXI2 1034 aa8.49□□□□□ -1.05
CASC18-201ENST00000547465 TPRNQ4KMQ1 711 aa8.43□□□□□ -1.06
CASC18-201ENST00000547465 MAPK8IP2Q13387 824 aaPredicted RBP8.41□□□□□ -1.06
CASC18-201ENST00000547465 DMRT2Q9Y5R5 561 aa8.39□□□□□ -1.07
CASC18-201ENST00000547465 DNAJC5BQ9UF47 199 aa8.38□□□□□ -1.07
CASC18-201ENST00000547465 POTEHQ6S545 545 aa8.37□□□□□ -1.07
CASC18-201ENST00000547465 ARXQ96QS3 562 aa8.37□□□□□ -1.07
CASC18-201ENST00000547465 VSIG10Q8N0Z9 540 aa8.36□□□□□ -1.07
CASC18-201ENST00000547465 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
CASC18-201ENST00000547465 SCAF1Q9H7N4 1312 aaKnown RBP8.29□□□□□ -1.08
CASC18-201ENST00000547465 TULP1O00294 542 aaPredicted RBP8.28□□□□□ -1.08
CASC18-201ENST00000547465 ATXN8OSP0DMR3 200 aa8.28□□□□□ -1.08
CASC18-201ENST00000547465 DCAF8L2P0C7V8 631 aa8.25□□□□□ -1.09
CASC18-201ENST00000547465 DCAF8L1A6NGE4 600 aa8.24□□□□□ -1.09
CASC18-201ENST00000547465 RNF39Q9H2S5 420 aa8.24□□□□□ -1.09
CASC18-201ENST00000547465 ERICH6Q7L0X2 663 aa8.19□□□□□ -1.1
CASC18-201ENST00000547465 GTF3C3Q9Y5Q9 886 aa8.17□□□□□ -1.1
CASC18-201ENST00000547465 HOMEZQ8IX15 550 aa8.16□□□□□ -1.1
CASC18-201ENST00000547465 KDM2AQ9Y2K7 1162 aa8.15□□□□□ -1.1
CASC18-201ENST00000547465 MYCNP04198 464 aaPredicted RBP8.13□□□□□ -1.11
CASC18-201ENST00000547465 SLC4A2P04920 1241 aa8.12□□□□□ -1.11
CASC18-201ENST00000547465 RNF216Q9NWF9 866 aaPredicted RBP8.11□□□□□ -1.11
CASC18-201ENST00000547465 FBLN2P98095 1184 aa8.09□□□□□ -1.11
CASC18-201ENST00000547465 FBXO3Q9UK99 471 aa8.08□□□□□ -1.12
CASC18-201ENST00000547465 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.07□□□□□ -1.12
CASC18-201ENST00000547465 C1QBPQ07021 282 aaKnown RBP8.05□□□□□ -1.12
CASC18-201ENST00000547465 PAXIP1Q6ZW49 1069 aaPredicted RBP8.01□□□□□ -1.13
CASC18-201ENST00000547465 BBXQ8WY36 941 aaPredicted RBP8.01□□□□□ -1.13
CASC18-201ENST00000547465 TMEM132AQ24JP5 1023 aa7.99□□□□□ -1.13
CASC18-201ENST00000547465 CFAP44Q96MT7 982 aa7.99□□□□□ -1.13
CASC18-201ENST00000547465 RANGAP1P46060 587 aaPredicted RBP7.98□□□□□ -1.13
CASC18-201ENST00000547465 PKD2Q13563 968 aa7.96□□□□□ -1.14
CASC18-201ENST00000547465 NBR1Q14596 966 aa7.96□□□□□ -1.14
CASC18-201ENST00000547465 C14orf37Q86TY3 774 aa7.96□□□□□ -1.14
CASC18-201ENST00000547465 VASPP50552 380 aaPredicted RBP7.95□□□□□ -1.14
CASC18-201ENST00000547465 TSHZ2Q9NRE2 1034 aa7.91□□□□□ -1.14
CASC18-201ENST00000547465 IFNLR1Q8IU57 520 aaPredicted RBP7.9□□□□□ -1.14
CASC18-201ENST00000547465 NPM1P06748 294 aaKnown RBP eCLIP7.88□□□□□ -1.15
CASC18-201ENST00000547465 SPRYD3Q8NCJ5 442 aa7.87□□□□□ -1.15
CASC18-201ENST00000547465 PODXL2Q9NZ53 605 aa7.85□□□□□ -1.15
CASC18-201ENST00000547465 ATF5Q9Y2D1 282 aaPredicted RBP7.85□□□□□ -1.15
CASC18-201ENST00000547465 HOXD11P31277 338 aaPredicted RBP7.84□□□□□ -1.15
CASC18-201ENST00000547465 SPDYE4A6NLX3 237 aa7.81□□□□□ -1.16
CASC18-201ENST00000547465 ECM2O94769 699 aaPredicted RBP7.79□□□□□ -1.16
CASC18-201ENST00000547465 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
CASC18-201ENST00000547465 PROM2Q8N271 834 aa7.76□□□□□ -1.17
CASC18-201ENST00000547465 SUPT5HO00267 1087 aaKnown RBP7.73□□□□□ -1.17
CASC18-201ENST00000547465 SAMD1Q6SPF0 538 aaPredicted RBP7.69□□□□□ -1.18
CASC18-201ENST00000547465 SPOCK2Q92563 424 aa7.69□□□□□ -1.18
CASC18-201ENST00000547465 RGL2O15211 777 aa7.68□□□□□ -1.18
CASC18-201ENST00000547465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.67□□□□□ -1.18
CASC18-201ENST00000547465 HNRNPUL2Q1KMD3 747 aaKnown RBP7.67□□□□□ -1.18
CASC18-201ENST00000547465 KLHL34Q8N239 644 aa7.66□□□□□ -1.18
CASC18-201ENST00000547465 CHGAP10645 457 aaKnown RBP7.64□□□□□ -1.19
CASC18-201ENST00000547465 NPM2Q86SE8 214 aaKnown RBP7.64□□□□□ -1.19
CASC18-201ENST00000547465 ZNF219Q9P2Y4 722 aaPredicted RBP7.63□□□□□ -1.19
CASC18-201ENST00000547465 TRIM26Q12899 539 aaPredicted RBP7.58□□□□□ -1.2
CASC18-201ENST00000547465 UBTFP17480 764 aaKnown RBP7.57□□□□□ -1.2
CASC18-201ENST00000547465 MKRN4PQ13434 485 aaPredicted RBP7.55□□□□□ -1.2
CASC18-201ENST00000547465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.53□□□□□ -1.2
CASC18-201ENST00000547465 BRPF1P55201 1214 aaPredicted RBP7.51□□□□□ -1.21
CASC18-201ENST00000547465 DSG3P32926 999 aa7.49□□□□□ -1.21
CASC18-201ENST00000547465 HS6ST3Q8IZP7 471 aa7.49□□□□□ -1.21
CASC18-201ENST00000547465 HRCP23327 699 aa7.48□□□□□ -1.21
CASC18-201ENST00000547465 SP7Q8TDD2 431 aaPredicted RBP7.47□□□□□ -1.21
CASC18-201ENST00000547465 U3KPZ7 1027 aaPredicted RBP7.47□□□□□ -1.21
CASC18-201ENST00000547465 NEUROD2Q15784 382 aa7.44□□□□□ -1.22
CASC18-201ENST00000547465 LMOD2Q6P5Q4 547 aa7.44□□□□□ -1.22
CASC18-201ENST00000547465 CIZ1Q9ULV3 898 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms