RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
TRAFD1-203ENST00000547063 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
TRAFD1-203ENST00000547063 MACF1Q9UPN3 7388 aaKnown RBP5.98□□□□□ -1.45
TRAFD1-203ENST00000547063 KRTAP5-9P26371 169 aa5.94□□□□□ -1.46
TRAFD1-203ENST00000547063 KTN1-AS1Q86SY8 53 aa5.94□□□□□ -1.46
TRAFD1-203ENST00000547063 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
TRAFD1-203ENST00000547063 SPRR2FQ96RM1 72 aa5.9□□□□□ -1.46
TRAFD1-203ENST00000547063 KMT2DO14686 5537 aa5.89□□□□□ -1.47
TRAFD1-203ENST00000547063 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
TRAFD1-203ENST00000547063 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
TRAFD1-203ENST00000547063 PRAC1Q96KF2 57 aa5.83□□□□□ -1.48
TRAFD1-203ENST00000547063 MT1EP04732 61 aa5.81□□□□□ -1.48
TRAFD1-203ENST00000547063 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
TRAFD1-203ENST00000547063 KRTAP5-3Q6L8H2 238 aa5.79□□□□□ -1.48
TRAFD1-203ENST00000547063 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
TRAFD1-203ENST00000547063 SPRR2EP22531 72 aa5.68□□□□□ -1.5
TRAFD1-203ENST00000547063 SPRR2BP35325 72 aa5.68□□□□□ -1.5
TRAFD1-203ENST00000547063 SPRR2AP35326 72 aa5.68□□□□□ -1.5
TRAFD1-203ENST00000547063 LCE1AQ5T7P2 110 aa5.66□□□□□ -1.5
TRAFD1-203ENST00000547063 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
TRAFD1-203ENST00000547063 MT1LQ93083 61 aa5.66□□□□□ -1.5
TRAFD1-203ENST00000547063 MT1GP13640 62 aa5.61□□□□□ -1.51
TRAFD1-203ENST00000547063 MUC12Q9UKN1 5478 aa5.57□□□□□ -1.52
TRAFD1-203ENST00000547063 SPRR2DP22532 72 aa5.49□□□□□ -1.53
TRAFD1-203ENST00000547063 MT1MQ8N339 61 aa5.49□□□□□ -1.53
TRAFD1-203ENST00000547063 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
TRAFD1-203ENST00000547063 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
TRAFD1-203ENST00000547063 NEBP20929 6669 aa5.39□□□□□ -1.55
TRAFD1-203ENST00000547063 KRTAP2-3P0C7H8 128 aa5.29□□□□□ -1.56
TRAFD1-203ENST00000547063 KRTAP4-3Q9BYR4 195 aa5.29□□□□□ -1.56
TRAFD1-203ENST00000547063 KRTAP2-4Q9BYR9 128 aa5.29□□□□□ -1.56
TRAFD1-203ENST00000547063 KRTAP20-1Q3LI63 56 aa5.26□□□□□ -1.57
TRAFD1-203ENST00000547063 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
TRAFD1-203ENST00000547063 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
TRAFD1-203ENST00000547063 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
TRAFD1-203ENST00000547063 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
TRAFD1-203ENST00000547063 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
TRAFD1-203ENST00000547063 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
TRAFD1-203ENST00000547063 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
TRAFD1-203ENST00000547063 KRTAP5-4Q6L8H1 288 aa4.89□□□□□ -1.63
TRAFD1-203ENST00000547063 MT1AP04731 61 aa4.84□□□□□ -1.63
TRAFD1-203ENST00000547063 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
TRAFD1-203ENST00000547063 KRTAP6-1Q3LI64 71 aa4.74□□□□□ -1.65
TRAFD1-203ENST00000547063 MT4P47944 62 aa4.72□□□□□ -1.65
TRAFD1-203ENST00000547063 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
TRAFD1-203ENST00000547063 GPR98Q8WXG9 6306 aa4.55□□□□□ -1.68
TRAFD1-203ENST00000547063 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
TRAFD1-203ENST00000547063 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
TRAFD1-203ENST00000547063 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
TRAFD1-203ENST00000547063 MT3P25713 68 aa4.42□□□□□ -1.7
TRAFD1-203ENST00000547063 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
TRAFD1-203ENST00000547063 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
TRAFD1-203ENST00000547063 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
TRAFD1-203ENST00000547063 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
TRAFD1-203ENST00000547063 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
TRAFD1-203ENST00000547063 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
TRAFD1-203ENST00000547063 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
TRAFD1-203ENST00000547063 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
TRAFD1-203ENST00000547063 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
TRAFD1-203ENST00000547063 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
TRAFD1-203ENST00000547063 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
TRAFD1-203ENST00000547063 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
TRAFD1-203ENST00000547063 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
TRAFD1-203ENST00000547063 INE1O15225 51 aa3.81□□□□□ -1.8
TRAFD1-203ENST00000547063 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
TRAFD1-203ENST00000547063 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
TRAFD1-203ENST00000547063 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
TRAFD1-203ENST00000547063 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
TRAFD1-203ENST00000547063 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
TRAFD1-203ENST00000547063 AHNAKQ09666 5890 aaKnown RBP3.49□□□□□ -1.85
TRAFD1-203ENST00000547063 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
TRAFD1-203ENST00000547063 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
TRAFD1-203ENST00000547063 PRM1P04553 51 aa3.25□□□□□ -1.89
TRAFD1-203ENST00000547063 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
TRAFD1-203ENST00000547063 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
TRAFD1-203ENST00000547063 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
TRAFD1-203ENST00000547063 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
TRAFD1-203ENST00000547063 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 238.6 ms