RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 UQCR11O14957 56 aa5.13□□□□□ -1.59
TROAP-203ENST00000546735 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
TROAP-203ENST00000546735 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
TROAP-203ENST00000546735 MT1MQ8N339 61 aa5.1□□□□□ -1.59
TROAP-203ENST00000546735 MT1LQ93083 61 aa5.09□□□□□ -1.59
TROAP-203ENST00000546735 A6NED7 52 aa5.08□□□□□ -1.6
TROAP-203ENST00000546735 MT4P47944 62 aa5.07□□□□□ -1.6
TROAP-203ENST00000546735 A8MU10 97 aa5.06□□□□□ -1.6
TROAP-203ENST00000546735 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
TROAP-203ENST00000546735 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
TROAP-203ENST00000546735 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
TROAP-203ENST00000546735 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
TROAP-203ENST00000546735 LCE3AQ5TA76 89 aa5.03□□□□□ -1.6
TROAP-203ENST00000546735 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
TROAP-203ENST00000546735 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
TROAP-203ENST00000546735 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
TROAP-203ENST00000546735 PMAIP1Q13794 54 aa4.97□□□□□ -1.61
TROAP-203ENST00000546735 TNP1P09430 55 aa4.95□□□□□ -1.62
TROAP-203ENST00000546735 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
TROAP-203ENST00000546735 KRTAP4-6Q9BYQ5 205 aa4.91□□□□□ -1.62
TROAP-203ENST00000546735 AHNAK2Q8IVF2 5795 aa4.9□□□□□ -1.62
TROAP-203ENST00000546735 K7ERS5 55 aa4.89□□□□□ -1.63
TROAP-203ENST00000546735 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
TROAP-203ENST00000546735 KRTAP5-10Q6L8G5 202 aa4.83□□□□□ -1.64
TROAP-203ENST00000546735 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
TROAP-203ENST00000546735 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
TROAP-203ENST00000546735 H3BS24 57 aa4.73□□□□□ -1.65
TROAP-203ENST00000546735 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
TROAP-203ENST00000546735 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
TROAP-203ENST00000546735 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
TROAP-203ENST00000546735 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
TROAP-203ENST00000546735 LOC100996750A0A140TA64 210 aa4.63□□□□□ -1.67
TROAP-203ENST00000546735 ROMO1P60602 79 aa4.62□□□□□ -1.67
TROAP-203ENST00000546735 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
TROAP-203ENST00000546735 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
TROAP-203ENST00000546735 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
TROAP-203ENST00000546735 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
TROAP-203ENST00000546735 A0A0A0MQY5 61 aa4.57□□□□□ -1.68
TROAP-203ENST00000546735 KRTAP15-1Q3LI76 137 aa4.43□□□□□ -1.7
TROAP-203ENST00000546735 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
TROAP-203ENST00000546735 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
TROAP-203ENST00000546735 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
TROAP-203ENST00000546735 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
TROAP-203ENST00000546735 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
TROAP-203ENST00000546735 MT1AP04731 61 aa4.31□□□□□ -1.72
TROAP-203ENST00000546735 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
TROAP-203ENST00000546735 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
TROAP-203ENST00000546735 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
TROAP-203ENST00000546735 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
TROAP-203ENST00000546735 KRTAP5-8O75690 187 aa4.17□□□□□ -1.74
TROAP-203ENST00000546735 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
TROAP-203ENST00000546735 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
TROAP-203ENST00000546735 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
TROAP-203ENST00000546735 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
TROAP-203ENST00000546735 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
TROAP-203ENST00000546735 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
TROAP-203ENST00000546735 MT3P25713 68 aa3.94□□□□□ -1.78
TROAP-203ENST00000546735 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
TROAP-203ENST00000546735 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
TROAP-203ENST00000546735 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
TROAP-203ENST00000546735 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
TROAP-203ENST00000546735 LCE1BQ5T7P3 118 aa3.5□□□□□ -1.85
TROAP-203ENST00000546735 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
TROAP-203ENST00000546735 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
TROAP-203ENST00000546735 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
TROAP-203ENST00000546735 INE1O15225 51 aa3.27□□□□□ -1.89
TROAP-203ENST00000546735 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
TROAP-203ENST00000546735 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
TROAP-203ENST00000546735 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
TROAP-203ENST00000546735 LCE1FQ5T754 118 aa3□□□□□ -1.93
TROAP-203ENST00000546735 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
TROAP-203ENST00000546735 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
TROAP-203ENST00000546735 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
TROAP-203ENST00000546735 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
TROAP-203ENST00000546735 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
TROAP-203ENST00000546735 PRM1P04553 51 aa2.39□□□□□ -2.03
TROAP-203ENST00000546735 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
TROAP-203ENST00000546735 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms