RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
SSH1-204ENST00000546697 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
SSH1-204ENST00000546697 MT1GP13640 62 aa5.56□□□□□ -1.52
SSH1-204ENST00000546697 TNP1P09430 55 aa5.52□□□□□ -1.53
SSH1-204ENST00000546697 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
SSH1-204ENST00000546697 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
SSH1-204ENST00000546697 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
SSH1-204ENST00000546697 MT1LQ93083 61 aa5.48□□□□□ -1.53
SSH1-204ENST00000546697 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
SSH1-204ENST00000546697 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
SSH1-204ENST00000546697 MT1MQ8N339 61 aa5.43□□□□□ -1.54
SSH1-204ENST00000546697 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
SSH1-204ENST00000546697 K7ERS5 55 aa5.35□□□□□ -1.55
SSH1-204ENST00000546697 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
SSH1-204ENST00000546697 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
SSH1-204ENST00000546697 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
SSH1-204ENST00000546697 LCE4AQ5TA78 99 aa5.27□□□□□ -1.57
SSH1-204ENST00000546697 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
SSH1-204ENST00000546697 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
SSH1-204ENST00000546697 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
SSH1-204ENST00000546697 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
SSH1-204ENST00000546697 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
SSH1-204ENST00000546697 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
SSH1-204ENST00000546697 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
SSH1-204ENST00000546697 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
SSH1-204ENST00000546697 MT4P47944 62 aa5.12□□□□□ -1.59
SSH1-204ENST00000546697 AHNAK2Q8IVF2 5795 aa5.11□□□□□ -1.59
SSH1-204ENST00000546697 ROMO1P60602 79 aa5.08□□□□□ -1.6
SSH1-204ENST00000546697 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
SSH1-204ENST00000546697 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
SSH1-204ENST00000546697 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
SSH1-204ENST00000546697 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
SSH1-204ENST00000546697 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
SSH1-204ENST00000546697 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
SSH1-204ENST00000546697 SYNE1Q8NF91 8797 aaKnown RBP4.89□□□□□ -1.63
SSH1-204ENST00000546697 KRTAP20-2Q3LI61 65 aa4.88□□□□□ -1.63
SSH1-204ENST00000546697 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
SSH1-204ENST00000546697 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
SSH1-204ENST00000546697 KRTAP5-7Q6L8G8 165 aa4.85□□□□□ -1.63
SSH1-204ENST00000546697 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
SSH1-204ENST00000546697 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
SSH1-204ENST00000546697 H3BS24 57 aa4.8□□□□□ -1.64
SSH1-204ENST00000546697 MT1AP04731 61 aa4.67□□□□□ -1.66
SSH1-204ENST00000546697 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
SSH1-204ENST00000546697 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
SSH1-204ENST00000546697 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
SSH1-204ENST00000546697 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
SSH1-204ENST00000546697 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
SSH1-204ENST00000546697 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
SSH1-204ENST00000546697 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
SSH1-204ENST00000546697 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
SSH1-204ENST00000546697 MT3P25713 68 aa4.26□□□□□ -1.73
SSH1-204ENST00000546697 MUC5BQ9HC84 5762 aaPredicted RBP4.26□□□□□ -1.73
SSH1-204ENST00000546697 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
SSH1-204ENST00000546697 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
SSH1-204ENST00000546697 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
SSH1-204ENST00000546697 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
SSH1-204ENST00000546697 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
SSH1-204ENST00000546697 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
SSH1-204ENST00000546697 KRTAP4-12Q9BQ66 201 aa3.98□□□□□ -1.77
SSH1-204ENST00000546697 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
SSH1-204ENST00000546697 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
SSH1-204ENST00000546697 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
SSH1-204ENST00000546697 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
SSH1-204ENST00000546697 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
SSH1-204ENST00000546697 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
SSH1-204ENST00000546697 INE1O15225 51 aa3.48□□□□□ -1.85
SSH1-204ENST00000546697 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
SSH1-204ENST00000546697 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
SSH1-204ENST00000546697 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
SSH1-204ENST00000546697 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SSH1-204ENST00000546697 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
SSH1-204ENST00000546697 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
SSH1-204ENST00000546697 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
SSH1-204ENST00000546697 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.98
SSH1-204ENST00000546697 PRM1P04553 51 aa2.58□□□□□ -2
SSH1-204ENST00000546697 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
SSH1-204ENST00000546697 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 131.9 ms