RNA–Protein interactions for RNA: ENST00000546626.1

PRPF40B-205, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-205ENST00000546626 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
PRPF40B-205ENST00000546626 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
PRPF40B-205ENST00000546626 KRTAP12-1P59990 96 aa5.06□□□□□ -1.6
PRPF40B-205ENST00000546626 SVIPQ8NHG7 77 aa5.04□□□□□ -1.6
PRPF40B-205ENST00000546626 MT1GP13640 62 aa5□□□□□ -1.61
PRPF40B-205ENST00000546626 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
PRPF40B-205ENST00000546626 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
PRPF40B-205ENST00000546626 PP632Q6XCG6 107 aa4.98□□□□□ -1.61
PRPF40B-205ENST00000546626 KTN1-AS1Q86SY8 53 aa4.97□□□□□ -1.61
PRPF40B-205ENST00000546626 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
PRPF40B-205ENST00000546626 ROMO1P60602 79 aa4.93□□□□□ -1.62
PRPF40B-205ENST00000546626 TNP1P09430 55 aa4.9□□□□□ -1.63
PRPF40B-205ENST00000546626 MT1MQ8N339 61 aa4.87□□□□□ -1.63
PRPF40B-205ENST00000546626 MT1LQ93083 61 aa4.87□□□□□ -1.63
PRPF40B-205ENST00000546626 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
PRPF40B-205ENST00000546626 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
PRPF40B-205ENST00000546626 LCE3AQ5TA76 89 aa4.83□□□□□ -1.64
PRPF40B-205ENST00000546626 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
PRPF40B-205ENST00000546626 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
PRPF40B-205ENST00000546626 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
PRPF40B-205ENST00000546626 MT4P47944 62 aa4.76□□□□□ -1.65
PRPF40B-205ENST00000546626 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
PRPF40B-205ENST00000546626 KRTAP4-3Q9BYR4 195 aa4.72□□□□□ -1.65
PRPF40B-205ENST00000546626 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
PRPF40B-205ENST00000546626 AHNAK2Q8IVF2 5795 aa4.69□□□□□ -1.66
PRPF40B-205ENST00000546626 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
PRPF40B-205ENST00000546626 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
PRPF40B-205ENST00000546626 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
PRPF40B-205ENST00000546626 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
PRPF40B-205ENST00000546626 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
PRPF40B-205ENST00000546626 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
PRPF40B-205ENST00000546626 KRTAP5-5Q701N2 237 aaPredicted RBP4.47□□□□□ -1.69
PRPF40B-205ENST00000546626 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
PRPF40B-205ENST00000546626 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
PRPF40B-205ENST00000546626 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
PRPF40B-205ENST00000546626 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
PRPF40B-205ENST00000546626 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
PRPF40B-205ENST00000546626 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
PRPF40B-205ENST00000546626 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
PRPF40B-205ENST00000546626 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
PRPF40B-205ENST00000546626 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
PRPF40B-205ENST00000546626 MT1AP04731 61 aa4.15□□□□□ -1.75
PRPF40B-205ENST00000546626 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
PRPF40B-205ENST00000546626 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
PRPF40B-205ENST00000546626 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
PRPF40B-205ENST00000546626 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
PRPF40B-205ENST00000546626 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
PRPF40B-205ENST00000546626 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
PRPF40B-205ENST00000546626 KRTAP6-2Q3LI66 62 aa3.95□□□□□ -1.78
PRPF40B-205ENST00000546626 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
PRPF40B-205ENST00000546626 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
PRPF40B-205ENST00000546626 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
PRPF40B-205ENST00000546626 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
PRPF40B-205ENST00000546626 MT3P25713 68 aa3.84□□□□□ -1.79
PRPF40B-205ENST00000546626 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
PRPF40B-205ENST00000546626 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
PRPF40B-205ENST00000546626 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
PRPF40B-205ENST00000546626 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
PRPF40B-205ENST00000546626 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
PRPF40B-205ENST00000546626 H3BS24 57 aa3.47□□□□□ -1.85
PRPF40B-205ENST00000546626 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
PRPF40B-205ENST00000546626 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
PRPF40B-205ENST00000546626 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
PRPF40B-205ENST00000546626 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
PRPF40B-205ENST00000546626 INE1O15225 51 aa3.24□□□□□ -1.89
PRPF40B-205ENST00000546626 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
PRPF40B-205ENST00000546626 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
PRPF40B-205ENST00000546626 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
PRPF40B-205ENST00000546626 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
PRPF40B-205ENST00000546626 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
PRPF40B-205ENST00000546626 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
PRPF40B-205ENST00000546626 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
PRPF40B-205ENST00000546626 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
PRPF40B-205ENST00000546626 PRM1P04553 51 aa2.56□□□□□ -2
PRPF40B-205ENST00000546626 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
PRPF40B-205ENST00000546626 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
PRPF40B-205ENST00000546626 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
PRPF40B-205ENST00000546626 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 57.9 ms