RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 R4GN34 69 aa4.11□□□□□ -1.75
TMEM116-203ENST00000546537 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
TMEM116-203ENST00000546537 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
TMEM116-203ENST00000546537 A6NED7 52 aa4.09□□□□□ -1.75
TMEM116-203ENST00000546537 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
TMEM116-203ENST00000546537 KRTAP19-7Q3SYF9 63 aa4.05□□□□□ -1.76
TMEM116-203ENST00000546537 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
TMEM116-203ENST00000546537 M0QZ58 72 aa4.04□□□□□ -1.76
TMEM116-203ENST00000546537 MT1EP04732 61 aa4.04□□□□□ -1.76
TMEM116-203ENST00000546537 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
TMEM116-203ENST00000546537 UQCR11O14957 56 aa4.03□□□□□ -1.76
TMEM116-203ENST00000546537 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
TMEM116-203ENST00000546537 P0C880 135 aa4.01□□□□□ -1.77
TMEM116-203ENST00000546537 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
TMEM116-203ENST00000546537 MIR22HGQ0VDD5 57 aa3.97□□□□□ -1.77
TMEM116-203ENST00000546537 MT1GP13640 62 aa3.96□□□□□ -1.78
TMEM116-203ENST00000546537 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
TMEM116-203ENST00000546537 A0A1B0GU33 70 aa3.93□□□□□ -1.78
TMEM116-203ENST00000546537 PP632Q6XCG6 107 aa3.91□□□□□ -1.78
TMEM116-203ENST00000546537 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
TMEM116-203ENST00000546537 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
TMEM116-203ENST00000546537 K7ERS5 55 aa3.89□□□□□ -1.79
TMEM116-203ENST00000546537 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
TMEM116-203ENST00000546537 MT1MQ8N339 61 aa3.88□□□□□ -1.79
TMEM116-203ENST00000546537 A8MU10 97 aa3.83□□□□□ -1.8
TMEM116-203ENST00000546537 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
TMEM116-203ENST00000546537 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
TMEM116-203ENST00000546537 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
TMEM116-203ENST00000546537 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
TMEM116-203ENST00000546537 MT1LQ93083 61 aa3.76□□□□□ -1.81
TMEM116-203ENST00000546537 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
TMEM116-203ENST00000546537 A0A0D9SG42 100 aa3.69□□□□□ -1.82
TMEM116-203ENST00000546537 KRTAP13-4Q3LI77 160 aa3.69□□□□□ -1.82
TMEM116-203ENST00000546537 CAMK2N1Q7Z7J9 78 aa3.68□□□□□ -1.82
TMEM116-203ENST00000546537 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
TMEM116-203ENST00000546537 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
TMEM116-203ENST00000546537 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
TMEM116-203ENST00000546537 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
TMEM116-203ENST00000546537 ROMO1P60602 79 aa3.64□□□□□ -1.83
TMEM116-203ENST00000546537 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
TMEM116-203ENST00000546537 KRTAP4-11Q9BYQ6 195 aa3.63□□□□□ -1.83
TMEM116-203ENST00000546537 SPINT4Q6UDR6 99 aa3.62□□□□□ -1.83
TMEM116-203ENST00000546537 MUC5BQ9HC84 5762 aaPredicted RBP3.62□□□□□ -1.83
TMEM116-203ENST00000546537 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
TMEM116-203ENST00000546537 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
TMEM116-203ENST00000546537 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
TMEM116-203ENST00000546537 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
TMEM116-203ENST00000546537 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
TMEM116-203ENST00000546537 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
TMEM116-203ENST00000546537 MT3P25713 68 aa3.49□□□□□ -1.85
TMEM116-203ENST00000546537 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
TMEM116-203ENST00000546537 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
TMEM116-203ENST00000546537 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
TMEM116-203ENST00000546537 TNP1P09430 55 aa3.38□□□□□ -1.87
TMEM116-203ENST00000546537 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
TMEM116-203ENST00000546537 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
TMEM116-203ENST00000546537 MT1AP04731 61 aa3.19□□□□□ -1.9
TMEM116-203ENST00000546537 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
TMEM116-203ENST00000546537 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
TMEM116-203ENST00000546537 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
TMEM116-203ENST00000546537 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
TMEM116-203ENST00000546537 LCE3CQ5T5A8 94 aa2.98□□□□□ -1.93
TMEM116-203ENST00000546537 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
TMEM116-203ENST00000546537 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
TMEM116-203ENST00000546537 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
TMEM116-203ENST00000546537 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
TMEM116-203ENST00000546537 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
TMEM116-203ENST00000546537 INE1O15225 51 aa2.55□□□□□ -2
TMEM116-203ENST00000546537 PHGR1C9JFL3 82 aa2.54□□□□□ -2
TMEM116-203ENST00000546537 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
TMEM116-203ENST00000546537 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
TMEM116-203ENST00000546537 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
TMEM116-203ENST00000546537 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
TMEM116-203ENST00000546537 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
TMEM116-203ENST00000546537 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
TMEM116-203ENST00000546537 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
TMEM116-203ENST00000546537 PRM1P04553 51 aa1.86□□□□□ -2.11
TMEM116-203ENST00000546537 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 123.5 ms