RNA–Protein interactions for RNA: ENST00000546503.1

TPCN1-205, Transcript of two pore segment channel 1, humanhuman

TSL 3

Gene TPCN1, Length 389 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-205ENST00000546503 KRTAP12-2P59991 146 aa2.3□□□□□ -2.04
TPCN1-205ENST00000546503 SPRR2GQ9BYE4 73 aa2.28□□□□□ -2.04
TPCN1-205ENST00000546503 M0QZ58 72 aa2.27□□□□□ -2.05
TPCN1-205ENST00000546503 MT1BP07438 61 aa2.24□□□□□ -2.05
TPCN1-205ENST00000546503 KRTAP19-8Q3LI54 63 aa2.24□□□□□ -2.05
TPCN1-205ENST00000546503 USH2AO75445 5202 aa2.23□□□□□ -2.05
TPCN1-205ENST00000546503 A0A0D9SG42 100 aa2.23□□□□□ -2.05
TPCN1-205ENST00000546503 CRIPTQ9P021 101 aa2.21□□□□□ -2.06
TPCN1-205ENST00000546503 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
TPCN1-205ENST00000546503 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
TPCN1-205ENST00000546503 MT1XP80297 61 aa2.16□□□□□ -2.06
TPCN1-205ENST00000546503 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
TPCN1-205ENST00000546503 KRTAP10-10P60014 251 aa2.15□□□□□ -2.07
TPCN1-205ENST00000546503 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
TPCN1-205ENST00000546503 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
TPCN1-205ENST00000546503 M0R2T5 61 aa2.12□□□□□ -2.07
TPCN1-205ENST00000546503 INE1O15225 51 aa2.1□□□□□ -2.07
TPCN1-205ENST00000546503 KMT2DO14686 5537 aa2.02□□□□□ -2.09
TPCN1-205ENST00000546503 KRTAP19-6Q3LI70 58 aa2.02□□□□□ -2.09
TPCN1-205ENST00000546503 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
TPCN1-205ENST00000546503 KRTAP8-1Q8IUC2 63 aa2□□□□□ -2.09
TPCN1-205ENST00000546503 PLAC4Q8WY50 150 aa2□□□□□ -2.09
TPCN1-205ENST00000546503 LCE3CQ5T5A8 94 aa1.98□□□□□ -2.09
TPCN1-205ENST00000546503 SPRR5A0A1B0GTR4 108 aa1.97□□□□□ -2.09
TPCN1-205ENST00000546503 TNP1P09430 55 aa1.97□□□□□ -2.09
TPCN1-205ENST00000546503 KRTAP5-5Q701N2 237 aaPredicted RBP1.97□□□□□ -2.09
TPCN1-205ENST00000546503 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
TPCN1-205ENST00000546503 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
TPCN1-205ENST00000546503 PP632Q6XCG6 107 aa1.95□□□□□ -2.1
TPCN1-205ENST00000546503 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
TPCN1-205ENST00000546503 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
TPCN1-205ENST00000546503 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.1
TPCN1-205ENST00000546503 KRTAP19-5Q3LI72 72 aa1.9□□□□□ -2.11
TPCN1-205ENST00000546503 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
TPCN1-205ENST00000546503 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
TPCN1-205ENST00000546503 MT1EP04732 61 aa1.87□□□□□ -2.11
TPCN1-205ENST00000546503 MACF1Q9UPN3 7388 aaKnown RBP1.87□□□□□ -2.11
TPCN1-205ENST00000546503 MT1LQ93083 61 aa1.84□□□□□ -2.11
TPCN1-205ENST00000546503 CRCT1Q9UGL9 99 aa1.83□□□□□ -2.12
TPCN1-205ENST00000546503 LCE3EQ5T5B0 92 aa1.8□□□□□ -2.12
TPCN1-205ENST00000546503 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
TPCN1-205ENST00000546503 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
TPCN1-205ENST00000546503 MT1MQ8N339 61 aa1.75□□□□□ -2.13
TPCN1-205ENST00000546503 NEBP20929 6669 aa1.74□□□□□ -2.13
TPCN1-205ENST00000546503 KRTAP19-3Q7Z4W3 81 aa1.74□□□□□ -2.13
TPCN1-205ENST00000546503 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
TPCN1-205ENST00000546503 MT1GP13640 62 aa1.7□□□□□ -2.14
TPCN1-205ENST00000546503 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
TPCN1-205ENST00000546503 KRTAP2-3P0C7H8 128 aa1.66□□□□□ -2.14
TPCN1-205ENST00000546503 KRTAP20-1Q3LI63 56 aa1.66□□□□□ -2.14
TPCN1-205ENST00000546503 KRTAP2-4Q9BYR9 128 aa1.66□□□□□ -2.14
TPCN1-205ENST00000546503 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
TPCN1-205ENST00000546503 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
TPCN1-205ENST00000546503 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
TPCN1-205ENST00000546503 DSTQ03001 7570 aaKnown RBP1.62□□□□□ -2.15
TPCN1-205ENST00000546503 KRTAP12-4P60329 112 aa1.6□□□□□ -2.15
TPCN1-205ENST00000546503 LCE3DQ9BYE3 92 aa1.6□□□□□ -2.15
TPCN1-205ENST00000546503 SPRR2EP22531 72 aa1.59□□□□□ -2.15
TPCN1-205ENST00000546503 SPRR2BP35325 72 aa1.59□□□□□ -2.15
TPCN1-205ENST00000546503 SPRR2AP35326 72 aa1.59□□□□□ -2.15
TPCN1-205ENST00000546503 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
TPCN1-205ENST00000546503 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
TPCN1-205ENST00000546503 MT1AP04731 61 aa1.54□□□□□ -2.16
TPCN1-205ENST00000546503 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
TPCN1-205ENST00000546503 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
TPCN1-205ENST00000546503 SPRR2DP22532 72 aa1.53□□□□□ -2.16
TPCN1-205ENST00000546503 HMCN1Q96RW7 5635 aa1.45□□□□□ -2.18
TPCN1-205ENST00000546503 MUC5BQ9HC84 5762 aaPredicted RBP1.43□□□□□ -2.18
TPCN1-205ENST00000546503 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
TPCN1-205ENST00000546503 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
TPCN1-205ENST00000546503 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
TPCN1-205ENST00000546503 MT4P47944 62 aa1.32□□□□□ -2.2
TPCN1-205ENST00000546503 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
TPCN1-205ENST00000546503 KRTAP5-10Q6L8G5 202 aa1.27□□□□□ -2.21
TPCN1-205ENST00000546503 PRM1P04553 51 aa1.15□□□□□ -2.23
TPCN1-205ENST00000546503 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
TPCN1-205ENST00000546503 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
TPCN1-205ENST00000546503 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 55.3 ms