RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, human

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC3A2-223	ENST00000546312	LUZP6	Q538Z0	58 aa		3.89	□□□□□ -1.79
SLC3A2-223	ENST00000546312	MT1B	P07438	61 aa		3.87	□□□□□ -1.79
SLC3A2-223	ENST00000546312	PRO2289	Q9P1D8	64 aa		3.83	□□□□□ -1.8
SLC3A2-223	ENST00000546312	SSPO	A2VEC9	5147 aa		3.83	□□□□□ -1.8
SLC3A2-223	ENST00000546312	KRTAP10-5	P60370	271 aa		3.78	□□□□□ -1.8
SLC3A2-223	ENST00000546312	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.77	□□□□□ -1.81
SLC3A2-223	ENST00000546312	KRTAP8-1	Q8IUC2	63 aa		3.71	□□□□□ -1.82
SLC3A2-223	ENST00000546312	SPRR5	A0A1B0GTR4	108 aa		3.69	□□□□□ -1.82
SLC3A2-223	ENST00000546312	LCE1F	Q5T754	118 aa		3.69	□□□□□ -1.82
SLC3A2-223	ENST00000546312	MT1X	P80297	61 aa		3.67	□□□□□ -1.82
SLC3A2-223	ENST00000546312	LCE3A	Q5TA76	89 aa		3.66	□□□□□ -1.82
SLC3A2-223	ENST00000546312	KRTAP10-12	P60413	245 aa		3.65	□□□□□ -1.83
SLC3A2-223	ENST00000546312	MACF1	Q9UPN3	7388 aa	Known RBP	3.62	□□□□□ -1.83
SLC3A2-223	ENST00000546312	KRTAP10-7	P60409	375 aa	Predicted RBP	3.6	□□□□□ -1.83
SLC3A2-223	ENST00000546312	KRTAP6-3	Q3LI67	103 aa		3.6	□□□□□ -1.83
SLC3A2-223	ENST00000546312	KRTAP12-3	P60328	96 aa		3.59	□□□□□ -1.83
SLC3A2-223	ENST00000546312	SYNE2	Q8WXH0	6885 aa	Known RBP	3.53	□□□□□ -1.84
SLC3A2-223	ENST00000546312	LCE1E	Q5T753	118 aa		3.51	□□□□□ -1.85
SLC3A2-223	ENST00000546312	KRTAP5-9	P26371	169 aa		3.48	□□□□□ -1.85
SLC3A2-223	ENST00000546312	LCE3C	Q5T5A8	94 aa		3.48	□□□□□ -1.85
SLC3A2-223	ENST00000546312	SPRR2F	Q96RM1	72 aa		3.42	□□□□□ -1.86
SLC3A2-223	ENST00000546312	KRTAP19-5	Q3LI72	72 aa		3.38	□□□□□ -1.87
SLC3A2-223	ENST00000546312	KMT2D	O14686	5537 aa		3.37	□□□□□ -1.87
SLC3A2-223	ENST00000546312	KRTAP5-11	Q6L8G4	156 aa		3.35	□□□□□ -1.87
SLC3A2-223	ENST00000546312	INE1	O15225	51 aa		3.34	□□□□□ -1.87
SLC3A2-223	ENST00000546312	SPRR2E	P22531	72 aa		3.34	□□□□□ -1.87
SLC3A2-223	ENST00000546312	SPRR2B	P35325	72 aa		3.34	□□□□□ -1.87
SLC3A2-223	ENST00000546312	SPRR2A	P35326	72 aa		3.34	□□□□□ -1.87
SLC3A2-223	ENST00000546312	KRTAP20-1	Q3LI63	56 aa		3.31	□□□□□ -1.88
SLC3A2-223	ENST00000546312	MUC12	Q9UKN1	5478 aa		3.29	□□□□□ -1.88
SLC3A2-223	ENST00000546312	NEB	P20929	6669 aa		3.29	□□□□□ -1.88
SLC3A2-223	ENST00000546312	KRTAP19-7	Q3SYF9	63 aa		3.28	□□□□□ -1.88
SLC3A2-223	ENST00000546312	MT1E	P04732	61 aa		3.24	□□□□□ -1.89
SLC3A2-223	ENST00000546312	KRTAP2-3	P0C7H8	128 aa		3.24	□□□□□ -1.89
SLC3A2-223	ENST00000546312	KRTAP2-4	Q9BYR9	128 aa		3.24	□□□□□ -1.89
SLC3A2-223	ENST00000546312	MDN1	Q9NU22	5596 aa		3.23	□□□□□ -1.89
SLC3A2-223	ENST00000546312	SPRR2D	P22532	72 aa		3.23	□□□□□ -1.89
SLC3A2-223	ENST00000546312	KRTAP19-3	Q7Z4W3	81 aa		3.2	□□□□□ -1.9
SLC3A2-223	ENST00000546312	MT1G	P13640	62 aa		3.19	□□□□□ -1.9
SLC3A2-223	ENST00000546312	MT1L	Q93083	61 aa		3.19	□□□□□ -1.9
SLC3A2-223	ENST00000546312	KRTAP9-6	A8MVA2	160 aa		3.17	□□□□□ -1.9
SLC3A2-223	ENST00000546312	LCE3E	Q5T5B0	92 aa		3.17	□□□□□ -1.9
SLC3A2-223	ENST00000546312	KRTAP2-1	Q9BYU5	128 aa		3.14	□□□□□ -1.91
SLC3A2-223	ENST00000546312	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.11	□□□□□ -1.91
SLC3A2-223	ENST00000546312	MT1M	Q8N339	61 aa		3.08	□□□□□ -1.92
SLC3A2-223	ENST00000546312	DST	Q03001	7570 aa	Known RBP	3.01	□□□□□ -1.93
SLC3A2-223	ENST00000546312	KRTAP4-3	Q9BYR4	195 aa		2.97	□□□□□ -1.93
SLC3A2-223	ENST00000546312	GPR98	Q8WXG9	6306 aa		2.94	□□□□□ -1.94
SLC3A2-223	ENST00000546312	KRTAP5-4	Q6L8H1	288 aa		2.84	□□□□□ -1.95
SLC3A2-223	ENST00000546312	MT4	P47944	62 aa		2.79	□□□□□ -1.96
SLC3A2-223	ENST00000546312	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.79	□□□□□ -1.96
SLC3A2-223	ENST00000546312	MT1A	P04731	61 aa		2.78	□□□□□ -1.96
SLC3A2-223	ENST00000546312	KRTAP5-1	Q6L8H4	278 aa		2.77	□□□□□ -1.97
SLC3A2-223	ENST00000546312	KRTAP12-4	P60329	112 aa		2.75	□□□□□ -1.97
SLC3A2-223	ENST00000546312	LCE3D	Q9BYE3	92 aa		2.68	□□□□□ -1.98
SLC3A2-223	ENST00000546312	KRTAP20-2	Q3LI61	65 aa		2.66	□□□□□ -1.98
SLC3A2-223	ENST00000546312	HMCN1	Q96RW7	5635 aa		2.66	□□□□□ -1.98
SLC3A2-223	ENST00000546312	KRTAP6-1	Q3LI64	71 aa		2.64	□□□□□ -1.99
SLC3A2-223	ENST00000546312	KRTAP4-4	Q9BYR3	166 aa		2.61	□□□□□ -1.99
SLC3A2-223	ENST00000546312	KRTAP5-10	Q6L8G5	202 aa		2.57	□□□□□ -2
SLC3A2-223	ENST00000546312	SYNE1	Q8NF91	8797 aa	Known RBP	2.57	□□□□□ -2
SLC3A2-223	ENST00000546312	AHNAK2	Q8IVF2	5795 aa		2.57	□□□□□ -2
SLC3A2-223	ENST00000546312	KRTAP5-7	Q6L8G8	165 aa		2.53	□□□□□ -2
SLC3A2-223	ENST00000546312	KRTAP5-2	Q701N4	177 aa		2.51	□□□□□ -2.01
SLC3A2-223	ENST00000546312	KRTAP6-2	Q3LI66	62 aa		2.49	□□□□□ -2.01
SLC3A2-223	ENST00000546312	OBSCN	Q5VST9	7968 aa		2.4	□□□□□ -2.03
SLC3A2-223	ENST00000546312	LCE1C	Q5T751	118 aa		2.34	□□□□□ -2.03
SLC3A2-223	ENST00000546312	LCE1B	Q5T7P3	118 aa		2.34	□□□□□ -2.03
SLC3A2-223	ENST00000546312	KRTAP5-8	O75690	187 aa		2.3	□□□□□ -2.04
SLC3A2-223	ENST00000546312	PRM1	P04553	51 aa		2.3	□□□□□ -2.04
SLC3A2-223	ENST00000546312	AHNAK	Q09666	5890 aa	Known RBP	2.27	□□□□□ -2.05
SLC3A2-223	ENST00000546312	MUC5AC	P98088	5654 aa		2.21	□□□□□ -2.06
SLC3A2-223	ENST00000546312	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.15	□□□□□ -2.06
SLC3A2-223	ENST00000546312	MUC19	Q7Z5P9	8384 aa		1.79	□□□□□ -2.12
SLC3A2-223	ENST00000546312	KRTAP21-2	Q3LI59	83 aa		1.74	□□□□□ -2.13
SLC3A2-223	ENST00000546312	PHGR1	C9JFL3	82 aa		1.58	□□□□□ -2.16
SLC3A2-223	ENST00000546312	KRTAP21-1	Q3LI58	79 aa		1.49	□□□□□ -2.17
SLC3A2-223	ENST00000546312	MUC16	Q8WXI7	14507 aa		1.05	□□□□□ -2.24

Retrieved 78 of 20,778 RNA–protein pairs in 150.2 ms