RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 SEC61GP60059 68 aa4.33□□□□□ -1.72
NECAP1-209ENST00000546181 MT1EP04732 61 aa4.31□□□□□ -1.72
NECAP1-209ENST00000546181 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
NECAP1-209ENST00000546181 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
NECAP1-209ENST00000546181 A0A1B0GU69 56 aa4.26□□□□□ -1.73
NECAP1-209ENST00000546181 PRR15LQ9BU68 103 aa4.24□□□□□ -1.73
NECAP1-209ENST00000546181 LINC01558Q9Y6Z2 57 aa4.21□□□□□ -1.74
NECAP1-209ENST00000546181 SMIM26A0A096LP01 95 aa4.2□□□□□ -1.74
NECAP1-209ENST00000546181 RPS28P62857 69 aaKnown RBP4.2□□□□□ -1.74
NECAP1-209ENST00000546181 KRTAP19-5Q3LI72 72 aa4.2□□□□□ -1.74
NECAP1-209ENST00000546181 V9GYY9 64 aa4.2□□□□□ -1.74
NECAP1-209ENST00000546181 A0A0D9SG42 100 aa4.19□□□□□ -1.74
NECAP1-209ENST00000546181 A0A1B0GU33 70 aa4.17□□□□□ -1.74
NECAP1-209ENST00000546181 MT4P47944 62 aa4.17□□□□□ -1.74
NECAP1-209ENST00000546181 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
NECAP1-209ENST00000546181 MT1GP13640 62 aa4.14□□□□□ -1.75
NECAP1-209ENST00000546181 Q1T7F1 81 aa4.14□□□□□ -1.75
NECAP1-209ENST00000546181 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
NECAP1-209ENST00000546181 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
NECAP1-209ENST00000546181 PSPHP1O15172 72 aa4.13□□□□□ -1.75
NECAP1-209ENST00000546181 MT1MQ8N339 61 aa4.13□□□□□ -1.75
NECAP1-209ENST00000546181 SPINT4Q6UDR6 99 aa4.11□□□□□ -1.75
NECAP1-209ENST00000546181 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
NECAP1-209ENST00000546181 MT1LQ93083 61 aa4.09□□□□□ -1.75
NECAP1-209ENST00000546181 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
NECAP1-209ENST00000546181 UQCR11O14957 56 aa4.08□□□□□ -1.76
NECAP1-209ENST00000546181 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
NECAP1-209ENST00000546181 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
NECAP1-209ENST00000546181 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
NECAP1-209ENST00000546181 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
NECAP1-209ENST00000546181 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
NECAP1-209ENST00000546181 A6NED7 52 aa4.03□□□□□ -1.76
NECAP1-209ENST00000546181 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
NECAP1-209ENST00000546181 A8MU10 97 aa4.02□□□□□ -1.77
NECAP1-209ENST00000546181 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
NECAP1-209ENST00000546181 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
NECAP1-209ENST00000546181 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
NECAP1-209ENST00000546181 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
NECAP1-209ENST00000546181 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
NECAP1-209ENST00000546181 K7ERS5 55 aa3.94□□□□□ -1.78
NECAP1-209ENST00000546181 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
NECAP1-209ENST00000546181 TNP1P09430 55 aa3.88□□□□□ -1.79
NECAP1-209ENST00000546181 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
NECAP1-209ENST00000546181 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
NECAP1-209ENST00000546181 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
NECAP1-209ENST00000546181 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
NECAP1-209ENST00000546181 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
NECAP1-209ENST00000546181 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
NECAP1-209ENST00000546181 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
NECAP1-209ENST00000546181 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
NECAP1-209ENST00000546181 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
NECAP1-209ENST00000546181 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
NECAP1-209ENST00000546181 ROMO1P60602 79 aa3.67□□□□□ -1.82
NECAP1-209ENST00000546181 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
NECAP1-209ENST00000546181 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
NECAP1-209ENST00000546181 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
NECAP1-209ENST00000546181 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
NECAP1-209ENST00000546181 LCE3EQ5T5B0 92 aa3.51□□□□□ -1.85
NECAP1-209ENST00000546181 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
NECAP1-209ENST00000546181 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
NECAP1-209ENST00000546181 MT1AP04731 61 aa3.46□□□□□ -1.86
NECAP1-209ENST00000546181 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
NECAP1-209ENST00000546181 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
NECAP1-209ENST00000546181 AHNAKQ09666 5890 aaKnown RBP3.39□□□□□ -1.87
NECAP1-209ENST00000546181 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
NECAP1-209ENST00000546181 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
NECAP1-209ENST00000546181 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
NECAP1-209ENST00000546181 LUZP6Q538Z0 58 aa3.12□□□□□ -1.91
NECAP1-209ENST00000546181 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
NECAP1-209ENST00000546181 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
NECAP1-209ENST00000546181 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
NECAP1-209ENST00000546181 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
NECAP1-209ENST00000546181 INE1O15225 51 aa2.43□□□□□ -2.02
NECAP1-209ENST00000546181 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
NECAP1-209ENST00000546181 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
NECAP1-209ENST00000546181 PRM1P04553 51 aa1.91□□□□□ -2.1
NECAP1-209ENST00000546181 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
NECAP1-209ENST00000546181 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 49.5 ms