RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
UBC-213ENST00000546120 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
UBC-213ENST00000546120 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
UBC-213ENST00000546120 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
UBC-213ENST00000546120 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
UBC-213ENST00000546120 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
UBC-213ENST00000546120 MT1EP04732 61 aa3.43□□□□□ -1.86
UBC-213ENST00000546120 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
UBC-213ENST00000546120 MACF1Q9UPN3 7388 aaKnown RBP3.4□□□□□ -1.87
UBC-213ENST00000546120 MT1LQ93083 61 aa3.39□□□□□ -1.87
UBC-213ENST00000546120 KRTAP4-8Q9BYQ9 185 aa3.39□□□□□ -1.87
UBC-213ENST00000546120 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
UBC-213ENST00000546120 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
UBC-213ENST00000546120 KRTAP12-4P60329 112 aa3.34□□□□□ -1.87
UBC-213ENST00000546120 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
UBC-213ENST00000546120 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
UBC-213ENST00000546120 MT1AP04731 61 aa3.25□□□□□ -1.89
UBC-213ENST00000546120 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
UBC-213ENST00000546120 MT1GP13640 62 aa3.17□□□□□ -1.9
UBC-213ENST00000546120 NEBP20929 6669 aa3.16□□□□□ -1.9
UBC-213ENST00000546120 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
UBC-213ENST00000546120 LCE1AQ5T7P2 110 aa3.15□□□□□ -1.91
UBC-213ENST00000546120 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
UBC-213ENST00000546120 MT3P25713 68 aa3.13□□□□□ -1.91
UBC-213ENST00000546120 KRTAP5-9P26371 169 aa3.09□□□□□ -1.91
UBC-213ENST00000546120 KMT2DO14686 5537 aa3.09□□□□□ -1.92
UBC-213ENST00000546120 LCE1DQ5T752 114 aa3.08□□□□□ -1.92
UBC-213ENST00000546120 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
UBC-213ENST00000546120 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
UBC-213ENST00000546120 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
UBC-213ENST00000546120 KRTAP20-1Q3LI63 56 aa3.04□□□□□ -1.92
UBC-213ENST00000546120 MT1MQ8N339 61 aa3.04□□□□□ -1.92
UBC-213ENST00000546120 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
UBC-213ENST00000546120 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
UBC-213ENST00000546120 SPRR2EP22531 72 aa2.99□□□□□ -1.93
UBC-213ENST00000546120 SPRR2BP35325 72 aa2.99□□□□□ -1.93
UBC-213ENST00000546120 SPRR2AP35326 72 aa2.99□□□□□ -1.93
UBC-213ENST00000546120 PRM1P04553 51 aa2.93□□□□□ -1.94
UBC-213ENST00000546120 KRTAP4-9Q9BYQ8 210 aa2.92□□□□□ -1.94
UBC-213ENST00000546120 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
UBC-213ENST00000546120 SPRR2DP22532 72 aa2.89□□□□□ -1.95
UBC-213ENST00000546120 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
UBC-213ENST00000546120 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
UBC-213ENST00000546120 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
UBC-213ENST00000546120 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
UBC-213ENST00000546120 KRTAP6-1Q3LI64 71 aa2.74□□□□□ -1.97
UBC-213ENST00000546120 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
UBC-213ENST00000546120 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
UBC-213ENST00000546120 KRTAP4-2Q9BYR5 136 aa2.7□□□□□ -1.98
UBC-213ENST00000546120 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
UBC-213ENST00000546120 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
UBC-213ENST00000546120 MT4P47944 62 aa2.54□□□□□ -2
UBC-213ENST00000546120 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
UBC-213ENST00000546120 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
UBC-213ENST00000546120 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
UBC-213ENST00000546120 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
UBC-213ENST00000546120 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
UBC-213ENST00000546120 KRTAP5-3Q6L8H2 238 aa2.34□□□□□ -2.03
UBC-213ENST00000546120 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
UBC-213ENST00000546120 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
UBC-213ENST00000546120 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
UBC-213ENST00000546120 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
UBC-213ENST00000546120 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
UBC-213ENST00000546120 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
UBC-213ENST00000546120 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
UBC-213ENST00000546120 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
UBC-213ENST00000546120 MUC5ACP98088 5654 aa2□□□□□ -2.09
UBC-213ENST00000546120 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
UBC-213ENST00000546120 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
UBC-213ENST00000546120 LCE1BQ5T7P3 118 aa1.98□□□□□ -2.09
UBC-213ENST00000546120 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
UBC-213ENST00000546120 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.95□□□□□ -2.1
UBC-213ENST00000546120 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
UBC-213ENST00000546120 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
UBC-213ENST00000546120 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
UBC-213ENST00000546120 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.2
UBC-213ENST00000546120 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms