RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 COA5Q86WW8 74 aa5.55□□□□□ -1.52
CPSF7-225ENST00000545934 TNP1P09430 55 aa5.49□□□□□ -1.53
CPSF7-225ENST00000545934 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
CPSF7-225ENST00000545934 SYNE1Q8NF91 8797 aaKnown RBP5.42□□□□□ -1.54
CPSF7-225ENST00000545934 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
CPSF7-225ENST00000545934 SMIM26A0A096LP01 95 aa5.4□□□□□ -1.54
CPSF7-225ENST00000545934 A8MU10 97 aa5.39□□□□□ -1.55
CPSF7-225ENST00000545934 SERP2Q8N6R1 65 aa5.39□□□□□ -1.55
CPSF7-225ENST00000545934 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
CPSF7-225ENST00000545934 K7ERU9 68 aa5.28□□□□□ -1.56
CPSF7-225ENST00000545934 A0A1B0GU69 56 aa5.26□□□□□ -1.57
CPSF7-225ENST00000545934 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
CPSF7-225ENST00000545934 AHNAKQ09666 5890 aaKnown RBP5.2□□□□□ -1.58
CPSF7-225ENST00000545934 KRTAP5-2Q701N4 177 aa5.18□□□□□ -1.58
CPSF7-225ENST00000545934 H7BZZ5 65 aa5.16□□□□□ -1.58
CPSF7-225ENST00000545934 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
CPSF7-225ENST00000545934 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
CPSF7-225ENST00000545934 MUC5BQ9HC84 5762 aaPredicted RBP5.11□□□□□ -1.59
CPSF7-225ENST00000545934 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
CPSF7-225ENST00000545934 COX7CP15954 63 aa5.1□□□□□ -1.59
CPSF7-225ENST00000545934 MT1AP04731 61 aa5.01□□□□□ -1.61
CPSF7-225ENST00000545934 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
CPSF7-225ENST00000545934 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
CPSF7-225ENST00000545934 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
CPSF7-225ENST00000545934 PRR15LQ9BU68 103 aa4.95□□□□□ -1.62
CPSF7-225ENST00000545934 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
CPSF7-225ENST00000545934 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
CPSF7-225ENST00000545934 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
CPSF7-225ENST00000545934 KRTAP9-9Q9BYP9 154 aa4.86□□□□□ -1.63
CPSF7-225ENST00000545934 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
CPSF7-225ENST00000545934 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
CPSF7-225ENST00000545934 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
CPSF7-225ENST00000545934 UQCR11O14957 56 aa4.8□□□□□ -1.64
CPSF7-225ENST00000545934 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
CPSF7-225ENST00000545934 KRTAP5-1Q6L8H4 278 aa4.71□□□□□ -1.66
CPSF7-225ENST00000545934 ATP5EP56381 51 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-225ENST00000545934 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.67
CPSF7-225ENST00000545934 ANAPC13Q9BS18 74 aa4.62□□□□□ -1.67
CPSF7-225ENST00000545934 CCDC179H3BU77 68 aa4.6□□□□□ -1.67
CPSF7-225ENST00000545934 K7ERS5 55 aa4.59□□□□□ -1.67
CPSF7-225ENST00000545934 MT3P25713 68 aa4.58□□□□□ -1.68
CPSF7-225ENST00000545934 TMEM258P61165 79 aa4.39□□□□□ -1.71
CPSF7-225ENST00000545934 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
CPSF7-225ENST00000545934 Q1T7F1 81 aa4.34□□□□□ -1.71
CPSF7-225ENST00000545934 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
CPSF7-225ENST00000545934 CDC42SE1Q9NRR8 79 aa4.32□□□□□ -1.72
CPSF7-225ENST00000545934 PSPHP1O15172 72 aa4.3□□□□□ -1.72
CPSF7-225ENST00000545934 ROMO1P60602 79 aa4.25□□□□□ -1.73
CPSF7-225ENST00000545934 V9GYY9 64 aa4.23□□□□□ -1.73
CPSF7-225ENST00000545934 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
CPSF7-225ENST00000545934 A6NED7 52 aa4.11□□□□□ -1.75
CPSF7-225ENST00000545934 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
CPSF7-225ENST00000545934 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
CPSF7-225ENST00000545934 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
CPSF7-225ENST00000545934 H3BS24 57 aa3.93□□□□□ -1.78
CPSF7-225ENST00000545934 KRTAP4-12Q9BQ66 201 aa3.86□□□□□ -1.79
CPSF7-225ENST00000545934 PCP4P48539 62 aa3.83□□□□□ -1.8
CPSF7-225ENST00000545934 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
CPSF7-225ENST00000545934 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
CPSF7-225ENST00000545934 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
CPSF7-225ENST00000545934 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
CPSF7-225ENST00000545934 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
CPSF7-225ENST00000545934 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
CPSF7-225ENST00000545934 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
CPSF7-225ENST00000545934 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
CPSF7-225ENST00000545934 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
CPSF7-225ENST00000545934 BRK1Q8WUW1 75 aa3.06□□□□□ -1.92
CPSF7-225ENST00000545934 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
CPSF7-225ENST00000545934 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
CPSF7-225ENST00000545934 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
CPSF7-225ENST00000545934 KTN1-AS1Q86SY8 53 aa2.84□□□□□ -1.95
CPSF7-225ENST00000545934 PRAC1Q96KF2 57 aa2.82□□□□□ -1.96
CPSF7-225ENST00000545934 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
CPSF7-225ENST00000545934 NDUFAF8A1L188 74 aa2.54□□□□□ -2
CPSF7-225ENST00000545934 LUZP6Q538Z0 58 aa2.4□□□□□ -2.03
CPSF7-225ENST00000545934 PRM1P04553 51 aa2.14□□□□□ -2.07
CPSF7-225ENST00000545934 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
CPSF7-225ENST00000545934 INE1O15225 51 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 59.8 ms