RNA–Protein interactions for RNA: ENST00000545870.1

PRKAB1-209, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 3

Gene PRKAB1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-209ENST00000545870 PRO2289Q9P1D8 64 aa3.35□□□□□ -1.87
PRKAB1-209ENST00000545870 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
PRKAB1-209ENST00000545870 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
PRKAB1-209ENST00000545870 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
PRKAB1-209ENST00000545870 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
PRKAB1-209ENST00000545870 MT3P25713 68 aa3.14□□□□□ -1.91
PRKAB1-209ENST00000545870 USH2AO75445 5202 aa3.11□□□□□ -1.91
PRKAB1-209ENST00000545870 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
PRKAB1-209ENST00000545870 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
PRKAB1-209ENST00000545870 SSPOA2VEC9 5147 aa3.03□□□□□ -1.92
PRKAB1-209ENST00000545870 KRTAP19-6Q3LI70 58 aa3.01□□□□□ -1.93
PRKAB1-209ENST00000545870 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
PRKAB1-209ENST00000545870 KRTAP19-7Q3SYF9 63 aa3□□□□□ -1.93
PRKAB1-209ENST00000545870 INE1O15225 51 aa2.96□□□□□ -1.94
PRKAB1-209ENST00000545870 MT1EP04732 61 aa2.94□□□□□ -1.94
PRKAB1-209ENST00000545870 MT1LQ93083 61 aa2.92□□□□□ -1.94
PRKAB1-209ENST00000545870 KMT2DO14686 5537 aa2.88□□□□□ -1.95
PRKAB1-209ENST00000545870 KRTAP9-6A8MVA2 160 aa2.85□□□□□ -1.95
PRKAB1-209ENST00000545870 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
PRKAB1-209ENST00000545870 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
PRKAB1-209ENST00000545870 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
PRKAB1-209ENST00000545870 MT1GP13640 62 aa2.79□□□□□ -1.96
PRKAB1-209ENST00000545870 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
PRKAB1-209ENST00000545870 KRTAP19-3Q7Z4W3 81 aa2.77□□□□□ -1.97
PRKAB1-209ENST00000545870 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
PRKAB1-209ENST00000545870 MT1MQ8N339 61 aa2.75□□□□□ -1.97
PRKAB1-209ENST00000545870 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
PRKAB1-209ENST00000545870 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
PRKAB1-209ENST00000545870 FSIP2Q5CZC0 6907 aa2.66□□□□□ -1.98
PRKAB1-209ENST00000545870 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
PRKAB1-209ENST00000545870 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
PRKAB1-209ENST00000545870 KRTAP4-3Q9BYR4 195 aa2.65□□□□□ -1.99
PRKAB1-209ENST00000545870 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
PRKAB1-209ENST00000545870 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
PRKAB1-209ENST00000545870 MACF1Q9UPN3 7388 aaKnown RBP2.58□□□□□ -2
PRKAB1-209ENST00000545870 CRCT1Q9UGL9 99 aa2.55□□□□□ -2
PRKAB1-209ENST00000545870 MT1AP04731 61 aa2.5□□□□□ -2.01
PRKAB1-209ENST00000545870 MDN1Q9NU22 5596 aa2.47□□□□□ -2.01
PRKAB1-209ENST00000545870 SPRR2EP22531 72 aa2.46□□□□□ -2.02
PRKAB1-209ENST00000545870 SPRR2BP35325 72 aa2.46□□□□□ -2.02
PRKAB1-209ENST00000545870 SPRR2AP35326 72 aa2.46□□□□□ -2.02
PRKAB1-209ENST00000545870 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
PRKAB1-209ENST00000545870 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
PRKAB1-209ENST00000545870 KRTAP12-4P60329 112 aa2.42□□□□□ -2.02
PRKAB1-209ENST00000545870 KRTAP6-3Q3LI67 103 aa2.42□□□□□ -2.02
PRKAB1-209ENST00000545870 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.02
PRKAB1-209ENST00000545870 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
PRKAB1-209ENST00000545870 SPRR2DP22532 72 aa2.38□□□□□ -2.03
PRKAB1-209ENST00000545870 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
PRKAB1-209ENST00000545870 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
PRKAB1-209ENST00000545870 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
PRKAB1-209ENST00000545870 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
PRKAB1-209ENST00000545870 LCE3EQ5T5B0 92 aa2.31□□□□□ -2.04
PRKAB1-209ENST00000545870 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
PRKAB1-209ENST00000545870 NEBP20929 6669 aa2.24□□□□□ -2.05
PRKAB1-209ENST00000545870 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
PRKAB1-209ENST00000545870 PRM1P04553 51 aa2.11□□□□□ -2.07
PRKAB1-209ENST00000545870 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
PRKAB1-209ENST00000545870 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
PRKAB1-209ENST00000545870 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
PRKAB1-209ENST00000545870 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
PRKAB1-209ENST00000545870 KRTAP20-1Q3LI63 56 aa2.02□□□□□ -2.09
PRKAB1-209ENST00000545870 MT4P47944 62 aa2.01□□□□□ -2.09
PRKAB1-209ENST00000545870 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
PRKAB1-209ENST00000545870 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
PRKAB1-209ENST00000545870 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
PRKAB1-209ENST00000545870 KRTAP5-10Q6L8G5 202 aa1.78□□□□□ -2.12
PRKAB1-209ENST00000545870 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
PRKAB1-209ENST00000545870 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
PRKAB1-209ENST00000545870 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
PRKAB1-209ENST00000545870 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
PRKAB1-209ENST00000545870 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
PRKAB1-209ENST00000545870 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
PRKAB1-209ENST00000545870 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
PRKAB1-209ENST00000545870 KRTAP21-1Q3LI58 79 aa1.37□□□□□ -2.19
PRKAB1-209ENST00000545870 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
PRKAB1-209ENST00000545870 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
PRKAB1-209ENST00000545870 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 117 ms