RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
NECAP1-208ENST00000545807 KMT2DO14686 5537 aa2.6□□□□□ -1.99
NECAP1-208ENST00000545807 SSPOA2VEC9 5147 aa2.58□□□□□ -2
NECAP1-208ENST00000545807 KRTAP10-12P60413 245 aa2.58□□□□□ -2
NECAP1-208ENST00000545807 MT1XP80297 61 aa2.58□□□□□ -2
NECAP1-208ENST00000545807 KRTAP10-5P60370 271 aa2.57□□□□□ -2
NECAP1-208ENST00000545807 LCE3AQ5TA76 89 aa2.56□□□□□ -2
NECAP1-208ENST00000545807 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
NECAP1-208ENST00000545807 KRTAP10-7P60409 375 aaPredicted RBP2.54□□□□□ -2
NECAP1-208ENST00000545807 CRCT1Q9UGL9 99 aa2.53□□□□□ -2
NECAP1-208ENST00000545807 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
NECAP1-208ENST00000545807 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
NECAP1-208ENST00000545807 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
NECAP1-208ENST00000545807 KRTAP2-1Q9BYU5 128 aa2.46□□□□□ -2.02
NECAP1-208ENST00000545807 FCGBPQ9Y6R7 5405 aaPredicted RBP2.45□□□□□ -2.02
NECAP1-208ENST00000545807 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
NECAP1-208ENST00000545807 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
NECAP1-208ENST00000545807 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
NECAP1-208ENST00000545807 KRTAP19-5Q3LI72 72 aa2.39□□□□□ -2.03
NECAP1-208ENST00000545807 MUC12Q9UKN1 5478 aa2.39□□□□□ -2.03
NECAP1-208ENST00000545807 SYNE2Q8WXH0 6885 aaKnown RBP2.38□□□□□ -2.03
NECAP1-208ENST00000545807 KRTAP19-6Q3LI70 58 aa2.37□□□□□ -2.03
NECAP1-208ENST00000545807 MACF1Q9UPN3 7388 aaKnown RBP2.37□□□□□ -2.03
NECAP1-208ENST00000545807 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
NECAP1-208ENST00000545807 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
NECAP1-208ENST00000545807 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
NECAP1-208ENST00000545807 KRTAP19-7Q3SYF9 63 aa2.3□□□□□ -2.04
NECAP1-208ENST00000545807 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
NECAP1-208ENST00000545807 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
NECAP1-208ENST00000545807 SPRR2FQ96RM1 72 aa2.27□□□□□ -2.05
NECAP1-208ENST00000545807 LCE1AQ5T7P2 110 aa2.25□□□□□ -2.05
NECAP1-208ENST00000545807 NEBP20929 6669 aa2.25□□□□□ -2.05
NECAP1-208ENST00000545807 MT1EP04732 61 aa2.24□□□□□ -2.05
NECAP1-208ENST00000545807 MDN1Q9NU22 5596 aa2.24□□□□□ -2.05
NECAP1-208ENST00000545807 KRTAP4-3Q9BYR4 195 aa2.22□□□□□ -2.05
NECAP1-208ENST00000545807 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
NECAP1-208ENST00000545807 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
NECAP1-208ENST00000545807 MT1LQ93083 61 aa2.21□□□□□ -2.06
NECAP1-208ENST00000545807 KRTAP19-3Q7Z4W3 81 aa2.14□□□□□ -2.07
NECAP1-208ENST00000545807 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
NECAP1-208ENST00000545807 MT1GP13640 62 aa2.13□□□□□ -2.07
NECAP1-208ENST00000545807 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
NECAP1-208ENST00000545807 MT1MQ8N339 61 aa2.12□□□□□ -2.07
NECAP1-208ENST00000545807 SPRR2EP22531 72 aa2.11□□□□□ -2.07
NECAP1-208ENST00000545807 SPRR2BP35325 72 aa2.11□□□□□ -2.07
NECAP1-208ENST00000545807 SPRR2AP35326 72 aa2.11□□□□□ -2.07
NECAP1-208ENST00000545807 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
NECAP1-208ENST00000545807 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
NECAP1-208ENST00000545807 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
NECAP1-208ENST00000545807 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
NECAP1-208ENST00000545807 PRM1P04553 51 aa2.03□□□□□ -2.08
NECAP1-208ENST00000545807 SPRR2DP22532 72 aa2.02□□□□□ -2.09
NECAP1-208ENST00000545807 KRTAP5-5Q701N2 237 aaPredicted RBP2□□□□□ -2.09
NECAP1-208ENST00000545807 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
NECAP1-208ENST00000545807 MT1AP04731 61 aa1.93□□□□□ -2.1
NECAP1-208ENST00000545807 KRTAP6-1Q3LI64 71 aa1.91□□□□□ -2.1
NECAP1-208ENST00000545807 MT3P25713 68 aa1.9□□□□□ -2.11
NECAP1-208ENST00000545807 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
NECAP1-208ENST00000545807 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
NECAP1-208ENST00000545807 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
NECAP1-208ENST00000545807 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
NECAP1-208ENST00000545807 MT4P47944 62 aa1.84□□□□□ -2.11
NECAP1-208ENST00000545807 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
NECAP1-208ENST00000545807 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
NECAP1-208ENST00000545807 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
NECAP1-208ENST00000545807 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
NECAP1-208ENST00000545807 KRTAP20-2Q3LI61 65 aa1.67□□□□□ -2.14
NECAP1-208ENST00000545807 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
NECAP1-208ENST00000545807 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
NECAP1-208ENST00000545807 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
NECAP1-208ENST00000545807 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
NECAP1-208ENST00000545807 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
NECAP1-208ENST00000545807 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
NECAP1-208ENST00000545807 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
NECAP1-208ENST00000545807 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
NECAP1-208ENST00000545807 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
NECAP1-208ENST00000545807 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
NECAP1-208ENST00000545807 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 46.9 ms