RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
LIMS2-217ENST00000545738 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
LIMS2-217ENST00000545738 MT1EP04732 61 aa6.03□□□□□ -1.44
LIMS2-217ENST00000545738 SPRR2EP22531 72 aa6.03□□□□□ -1.44
LIMS2-217ENST00000545738 SPRR2BP35325 72 aa6.03□□□□□ -1.44
LIMS2-217ENST00000545738 SPRR2AP35326 72 aa6.03□□□□□ -1.44
LIMS2-217ENST00000545738 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
LIMS2-217ENST00000545738 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
LIMS2-217ENST00000545738 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
LIMS2-217ENST00000545738 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
LIMS2-217ENST00000545738 MT1LQ93083 61 aa5.83□□□□□ -1.48
LIMS2-217ENST00000545738 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
LIMS2-217ENST00000545738 SPRR2DP22532 72 aa5.81□□□□□ -1.48
LIMS2-217ENST00000545738 INE1O15225 51 aa5.79□□□□□ -1.48
LIMS2-217ENST00000545738 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
LIMS2-217ENST00000545738 MT1GP13640 62 aa5.74□□□□□ -1.49
LIMS2-217ENST00000545738 KRTAP20-1Q3LI63 56 aa5.73□□□□□ -1.49
LIMS2-217ENST00000545738 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
LIMS2-217ENST00000545738 MT1MQ8N339 61 aa5.71□□□□□ -1.5
LIMS2-217ENST00000545738 KRTAP2-3P0C7H8 128 aa5.68□□□□□ -1.5
LIMS2-217ENST00000545738 KRTAP2-4Q9BYR9 128 aa5.68□□□□□ -1.5
LIMS2-217ENST00000545738 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
LIMS2-217ENST00000545738 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
LIMS2-217ENST00000545738 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
LIMS2-217ENST00000545738 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
LIMS2-217ENST00000545738 KRTAP2-1Q9BYU5 128 aa5.53□□□□□ -1.52
LIMS2-217ENST00000545738 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
LIMS2-217ENST00000545738 KRTAP19-4Q3LI73 84 aa5.4□□□□□ -1.55
LIMS2-217ENST00000545738 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
LIMS2-217ENST00000545738 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
LIMS2-217ENST00000545738 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
LIMS2-217ENST00000545738 KRTAP5-4Q6L8H1 288 aa5.2□□□□□ -1.58
LIMS2-217ENST00000545738 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
LIMS2-217ENST00000545738 LCE4AQ5TA78 99 aa5.12□□□□□ -1.59
LIMS2-217ENST00000545738 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
LIMS2-217ENST00000545738 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
LIMS2-217ENST00000545738 MT4P47944 62 aa5.09□□□□□ -1.59
LIMS2-217ENST00000545738 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
LIMS2-217ENST00000545738 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
LIMS2-217ENST00000545738 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
LIMS2-217ENST00000545738 MT1AP04731 61 aa4.94□□□□□ -1.62
LIMS2-217ENST00000545738 KRTAP20-2Q3LI61 65 aa4.87□□□□□ -1.63
LIMS2-217ENST00000545738 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
LIMS2-217ENST00000545738 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
LIMS2-217ENST00000545738 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
LIMS2-217ENST00000545738 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
LIMS2-217ENST00000545738 GPR98Q8WXG9 6306 aa4.65□□□□□ -1.67
LIMS2-217ENST00000545738 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
LIMS2-217ENST00000545738 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
LIMS2-217ENST00000545738 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
LIMS2-217ENST00000545738 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
LIMS2-217ENST00000545738 MT3P25713 68 aa4.45□□□□□ -1.7
LIMS2-217ENST00000545738 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
LIMS2-217ENST00000545738 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
LIMS2-217ENST00000545738 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
LIMS2-217ENST00000545738 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
LIMS2-217ENST00000545738 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
LIMS2-217ENST00000545738 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
LIMS2-217ENST00000545738 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
LIMS2-217ENST00000545738 MUC5BQ9HC84 5762 aaPredicted RBP3.86□□□□□ -1.79
LIMS2-217ENST00000545738 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
LIMS2-217ENST00000545738 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
LIMS2-217ENST00000545738 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
LIMS2-217ENST00000545738 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
LIMS2-217ENST00000545738 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
LIMS2-217ENST00000545738 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
LIMS2-217ENST00000545738 PRM1P04553 51 aa3.6□□□□□ -1.83
LIMS2-217ENST00000545738 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
LIMS2-217ENST00000545738 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
LIMS2-217ENST00000545738 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
LIMS2-217ENST00000545738 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
LIMS2-217ENST00000545738 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
LIMS2-217ENST00000545738 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
LIMS2-217ENST00000545738 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
LIMS2-217ENST00000545738 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
LIMS2-217ENST00000545738 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
LIMS2-217ENST00000545738 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 87.9 ms