RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 VPS25Q9BRG1 176 aa0.75□□□□□ -2.29
SNHG1-224ENST00000545688 ORMDL1Q9P0S3 153 aa0.75□□□□□ -2.29
SNHG1-224ENST00000545688 A0A1B0GV72 72 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 A6NED7 52 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 C9JAW5 83 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 HCG22E2RYF7 251 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 H3BT86 120 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 K7EP34 96 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 K7ERJ3 54 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 M0QZ58 72 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 NDUFS5O43920 106 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 SCGB1A1P11684 91 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 NAA38Q9BRA0 125 aaKnown RBP0.74□□□□□ -2.29
SNHG1-224ENST00000545688 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
SNHG1-224ENST00000545688 NDUFC1O43677 76 aa0.73□□□□□ -2.29
SNHG1-224ENST00000545688 NREPQ16612 68 aa0.73□□□□□ -2.29
SNHG1-224ENST00000545688 ETDBQ3ZM63 59 aa0.73□□□□□ -2.29
SNHG1-224ENST00000545688 LOC110117498A0A087WWA1 95 aa0.72□□□□□ -2.29
SNHG1-224ENST00000545688 LINC00643Q86TS7 51 aa0.72□□□□□ -2.29
SNHG1-224ENST00000545688 CYP4F30PQ9H0H9 118 aa0.72□□□□□ -2.29
SNHG1-224ENST00000545688 FAM240AA0A1B0GVK7 77 aa0.71□□□□□ -2.3
SNHG1-224ENST00000545688 HIST1H4AP62805 103 aaKnown RBP0.71□□□□□ -2.3
SNHG1-224ENST00000545688 ATP5EP2Q5VTU8 51 aa0.71□□□□□ -2.3
SNHG1-224ENST00000545688 CASC2Q6XLA1 102 aa0.71□□□□□ -2.3
SNHG1-224ENST00000545688 SMIM20Q8N5G0 67 aa0.71□□□□□ -2.3
SNHG1-224ENST00000545688 C14orf132Q9NPU4 83 aa0.71□□□□□ -2.3
SNHG1-224ENST00000545688 A0A0D9SG42 100 aa0.7□□□□□ -2.3
SNHG1-224ENST00000545688 LINC01554Q52M75 96 aa0.7□□□□□ -2.3
SNHG1-224ENST00000545688 C20orf197Q8N268 126 aa0.7□□□□□ -2.3
SNHG1-224ENST00000545688 ANAPC13Q9BS18 74 aa0.7□□□□□ -2.3
SNHG1-224ENST00000545688 PRO0628Q9UI54 55 aa0.7□□□□□ -2.3
SNHG1-224ENST00000545688 ATOX1O00244 68 aa0.69□□□□□ -2.3
SNHG1-224ENST00000545688 MP68P56378 58 aa0.69□□□□□ -2.3
SNHG1-224ENST00000545688 KRTAP6-1Q3LI64 71 aa0.69□□□□□ -2.3
SNHG1-224ENST00000545688 UQCRQO14949 82 aa0.68□□□□□ -2.3
SNHG1-224ENST00000545688 MT-ATP8P03928 68 aa0.68□□□□□ -2.3
SNHG1-224ENST00000545688 MT1AP04731 61 aa0.68□□□□□ -2.3
SNHG1-224ENST00000545688 KRTAP6-2Q3LI66 62 aa0.68□□□□□ -2.3
SNHG1-224ENST00000545688 SERP2Q8N6R1 65 aa0.68□□□□□ -2.3
SNHG1-224ENST00000545688 TP53AIP1Q9HCN2 124 aa0.68□□□□□ -2.3
SNHG1-224ENST00000545688 TRAV7A0A075B6U4 112 aa0.67□□□□□ -2.3
SNHG1-224ENST00000545688 H3BPC8 53 aa0.67□□□□□ -2.3
SNHG1-224ENST00000545688 COX7CP15954 63 aa0.67□□□□□ -2.3
SNHG1-224ENST00000545688 C10orf95Q9H7T3 257 aa0.67□□□□□ -2.3
SNHG1-224ENST00000545688 TRAV22A0A0B4J277 110 aa0.66□□□□□ -2.3
SNHG1-224ENST00000545688 LOC101927531A0A1B0GV80 90 aa0.66□□□□□ -2.3
SNHG1-224ENST00000545688 ATP5EP56381 51 aaPredicted RBP0.66□□□□□ -2.3
SNHG1-224ENST00000545688 TMEM258P61165 79 aa0.66□□□□□ -2.3
SNHG1-224ENST00000545688 SPTSSBQ8NFR3 76 aa0.66□□□□□ -2.3
SNHG1-224ENST00000545688 LINC00208Q96KT6 92 aa0.66□□□□□ -2.3
SNHG1-224ENST00000545688 H0Y9P7 68 aa0.65□□□□□ -2.31
SNHG1-224ENST00000545688 CHKB-CPT1BH3BT56 60 aa0.65□□□□□ -2.31
SNHG1-224ENST00000545688 ACYP2P14621 99 aa0.65□□□□□ -2.31
SNHG1-224ENST00000545688 RPS28P62857 69 aaKnown RBP0.65□□□□□ -2.31
SNHG1-224ENST00000545688 CCDC179H3BU77 68 aa0.64□□□□□ -2.31
SNHG1-224ENST00000545688 PRR15LQ9BU68 103 aa0.64□□□□□ -2.31
SNHG1-224ENST00000545688 SNURFQ9Y675 71 aa0.64□□□□□ -2.31
SNHG1-224ENST00000545688 SERP1Q9Y6X1 66 aa0.64□□□□□ -2.31
SNHG1-224ENST00000545688 V9GYY9 64 aa0.64□□□□□ -2.31
SNHG1-224ENST00000545688 H7BZZ5 65 aa0.62□□□□□ -2.31
SNHG1-224ENST00000545688 COA5Q86WW8 74 aa0.61□□□□□ -2.31
SNHG1-224ENST00000545688 A0A1B0GU69 56 aa0.6□□□□□ -2.31
SNHG1-224ENST00000545688 UQCR11O14957 56 aa0.6□□□□□ -2.31
SNHG1-224ENST00000545688 Q1T7F1 81 aa0.6□□□□□ -2.31
SNHG1-224ENST00000545688 DMAC1Q96GE9 116 aa0.6□□□□□ -2.31
SNHG1-224ENST00000545688 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
SNHG1-224ENST00000545688 BRK1Q8WUW1 75 aa0.59□□□□□ -2.31
SNHG1-224ENST00000545688 LINC01558Q9Y6Z2 57 aa0.59□□□□□ -2.31
SNHG1-224ENST00000545688 PMAIP1Q13794 54 aa0.58□□□□□ -2.32
SNHG1-224ENST00000545688 MIR22HGQ0VDD5 57 aa0.57□□□□□ -2.32
SNHG1-224ENST00000545688 TNP1P09430 55 aa0.56□□□□□ -2.32
SNHG1-224ENST00000545688 SPATA8Q6RVD6 105 aa0.56□□□□□ -2.32
SNHG1-224ENST00000545688 CDC42SE1Q9NRR8 79 aa0.56□□□□□ -2.32
SNHG1-224ENST00000545688 ROMO1P60602 79 aa0.53□□□□□ -2.32
SNHG1-224ENST00000545688 KTN1-AS1Q86SY8 53 aa0.53□□□□□ -2.32
SNHG1-224ENST00000545688 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
SNHG1-224ENST00000545688 INE1O15225 51 aa0.38□□□□□ -2.35
SNHG1-224ENST00000545688 PRM1P04553 51 aa0.25□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms