RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621		K7ERS5	55 aa		5.77	□□□□□ -1.49
HMBS-222	ENST00000545621	MT1G	P13640	62 aa		5.75	□□□□□ -1.49
HMBS-222	ENST00000545621		A6NED7	52 aa		5.73	□□□□□ -1.49
HMBS-222	ENST00000545621	MT1L	Q93083	61 aa		5.72	□□□□□ -1.49
HMBS-222	ENST00000545621	KRTAP25-1	Q3LHN0	102 aa		5.71	□□□□□ -1.5
HMBS-222	ENST00000545621	DST	Q03001	7570 aa	Known RBP	5.68	□□□□□ -1.5
HMBS-222	ENST00000545621	PP632	Q6XCG6	107 aa		5.67	□□□□□ -1.5
HMBS-222	ENST00000545621	MT1M	Q8N339	61 aa		5.65	□□□□□ -1.5
HMBS-222	ENST00000545621	KRTAP12-3	P60328	96 aa		5.63	□□□□□ -1.51
HMBS-222	ENST00000545621	KRTAP23-1	A1A580	65 aa		5.56	□□□□□ -1.52
HMBS-222	ENST00000545621	CDC42SE1	Q9NRR8	79 aa		5.56	□□□□□ -1.52
HMBS-222	ENST00000545621	KRTAP4-3	Q9BYR4	195 aa		5.47	□□□□□ -1.53
HMBS-222	ENST00000545621	GPR98	Q8WXG9	6306 aa		5.47	□□□□□ -1.53
HMBS-222	ENST00000545621	ROMO1	P60602	79 aa		5.45	□□□□□ -1.54
HMBS-222	ENST00000545621	KRTAP4-7	Q9BYR0	210 aa		5.42	□□□□□ -1.54
HMBS-222	ENST00000545621	KRTAP19-4	Q3LI73	84 aa		5.4	□□□□□ -1.54
HMBS-222	ENST00000545621	LCE4A	Q5TA78	99 aa		5.34	□□□□□ -1.55
HMBS-222	ENST00000545621	KRTAP15-1	Q3LI76	137 aa		5.33	□□□□□ -1.56
HMBS-222	ENST00000545621	KRTAP5-4	Q6L8H1	288 aa		5.32	□□□□□ -1.56
HMBS-222	ENST00000545621	KRTAP4-9	Q9BYQ8	210 aa		5.32	□□□□□ -1.56
HMBS-222	ENST00000545621	LCE1D	Q5T752	114 aa		5.27	□□□□□ -1.57
HMBS-222	ENST00000545621	LCE3C	Q5T5A8	94 aa		5.21	□□□□□ -1.58
HMBS-222	ENST00000545621	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.21	□□□□□ -1.58
HMBS-222	ENST00000545621	MT4	P47944	62 aa		5.19	□□□□□ -1.58
HMBS-222	ENST00000545621	HMCN1	Q96RW7	5635 aa		5.14	□□□□□ -1.59
HMBS-222	ENST00000545621	LOC100996750	A0A140TA64	210 aa		5.12	□□□□□ -1.59
HMBS-222	ENST00000545621	BRK1	Q8WUW1	75 aa		5.11	□□□□□ -1.59
HMBS-222	ENST00000545621	KRTAP4-6	Q9BYQ5	205 aa		5.11	□□□□□ -1.59
HMBS-222	ENST00000545621	SPRR5	A0A1B0GTR4	108 aa		4.98	□□□□□ -1.61
HMBS-222	ENST00000545621	SYNE1	Q8NF91	8797 aa	Known RBP	4.98	□□□□□ -1.61
HMBS-222	ENST00000545621	KRTAP20-2	Q3LI61	65 aa		4.97	□□□□□ -1.61
HMBS-222	ENST00000545621	KRTAP12-4	P60329	112 aa		4.95	□□□□□ -1.62
HMBS-222	ENST00000545621	KRTAP9-6	A8MVA2	160 aa		4.94	□□□□□ -1.62
HMBS-222	ENST00000545621	AHNAK2	Q8IVF2	5795 aa		4.89	□□□□□ -1.63
HMBS-222	ENST00000545621	MT1A	P04731	61 aa		4.87	□□□□□ -1.63
HMBS-222	ENST00000545621	KRTAP5-3	Q6L8H2	238 aa		4.84	□□□□□ -1.63
HMBS-222	ENST00000545621	PMAIP1	Q13794	54 aa		4.82	□□□□□ -1.64
HMBS-222	ENST00000545621	KRTAP6-1	Q3LI64	71 aa		4.82	□□□□□ -1.64
HMBS-222	ENST00000545621	KRTAP5-10	Q6L8G5	202 aa		4.82	□□□□□ -1.64
HMBS-222	ENST00000545621	KRTAP5-2	Q701N4	177 aa		4.7	□□□□□ -1.66
HMBS-222	ENST00000545621	KRTAP9-4	Q9BYQ2	154 aa		4.68	□□□□□ -1.66
HMBS-222	ENST00000545621	PRO0628	Q9UI54	55 aa		4.63	□□□□□ -1.67
HMBS-222	ENST00000545621	KRTAP5-7	Q6L8G8	165 aa		4.61	□□□□□ -1.67
HMBS-222	ENST00000545621	PRAC1	Q96KF2	57 aa		4.6	□□□□□ -1.67
HMBS-222	ENST00000545621	KRTAP6-2	Q3LI66	62 aa		4.55	□□□□□ -1.68
HMBS-222	ENST00000545621	KRTAP4-11	Q9BYQ6	195 aa		4.48	□□□□□ -1.69
HMBS-222	ENST00000545621	MT3	P25713	68 aa		4.43	□□□□□ -1.7
HMBS-222	ENST00000545621	KTN1-AS1	Q86SY8	53 aa		4.4	□□□□□ -1.71
HMBS-222	ENST00000545621	OBSCN	Q5VST9	7968 aa		4.35	□□□□□ -1.71
HMBS-222	ENST00000545621	KRTAP5-8	O75690	187 aa		4.35	□□□□□ -1.71
HMBS-222	ENST00000545621	SVIP	Q8NHG7	77 aa		4.32	□□□□□ -1.72
HMBS-222	ENST00000545621	KRTAP5-1	Q6L8H4	278 aa		4.17	□□□□□ -1.74
HMBS-222	ENST00000545621	AHNAK	Q09666	5890 aa	Known RBP	4.11	□□□□□ -1.75
HMBS-222	ENST00000545621	LCE1E	Q5T753	118 aa		4.06	□□□□□ -1.76
HMBS-222	ENST00000545621	KRTAP9-9	Q9BYP9	154 aa		4.03	□□□□□ -1.76
HMBS-222	ENST00000545621	MUC5AC	P98088	5654 aa		4.02	□□□□□ -1.77
HMBS-222	ENST00000545621	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.98	□□□□□ -1.77
HMBS-222	ENST00000545621	KRTAP4-12	Q9BQ66	201 aa		3.92	□□□□□ -1.78
HMBS-222	ENST00000545621	LUZP6	Q538Z0	58 aa		3.84	□□□□□ -1.79
HMBS-222	ENST00000545621	KRTAP4-2	Q9BYR5	136 aa		3.82	□□□□□ -1.8
HMBS-222	ENST00000545621		H3BS24	57 aa		3.8	□□□□□ -1.8
HMBS-222	ENST00000545621	LCE3D	Q9BYE3	92 aa		3.78	□□□□□ -1.8
HMBS-222	ENST00000545621	LCE1C	Q5T751	118 aa		3.77	□□□□□ -1.81
HMBS-222	ENST00000545621	LCE1B	Q5T7P3	118 aa		3.77	□□□□□ -1.81
HMBS-222	ENST00000545621	LCE3E	Q5T5B0	92 aa		3.6	□□□□□ -1.83
HMBS-222	ENST00000545621	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.48	□□□□□ -1.85
HMBS-222	ENST00000545621	KRTAP5-11	Q6L8G4	156 aa		3.41	□□□□□ -1.86
HMBS-222	ENST00000545621	LCE1F	Q5T754	118 aa		3.27	□□□□□ -1.89
HMBS-222	ENST00000545621	NDUFAF8	A1L188	74 aa		3.22	□□□□□ -1.89
HMBS-222	ENST00000545621	KRTAP21-2	Q3LI59	83 aa		3.2	□□□□□ -1.9
HMBS-222	ENST00000545621	PHGR1	C9JFL3	82 aa		2.93	□□□□□ -1.94
HMBS-222	ENST00000545621	KRTAP4-4	Q9BYR3	166 aa		2.83	□□□□□ -1.96
HMBS-222	ENST00000545621		A0A0A0MQY5	61 aa		2.82	□□□□□ -1.96
HMBS-222	ENST00000545621	PRM1	P04553	51 aa		2.79	□□□□□ -1.96
HMBS-222	ENST00000545621	INE1	O15225	51 aa		2.68	□□□□□ -1.98
HMBS-222	ENST00000545621	MUC19	Q7Z5P9	8384 aa		2.68	□□□□□ -1.98
HMBS-222	ENST00000545621	KRTAP21-1	Q3LI58	79 aa		2.1	□□□□□ -2.07
HMBS-222	ENST00000545621	MUC16	Q8WXI7	14507 aa		1.95	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 16.1 ms