RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
LTBR-214ENST00000545445 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
LTBR-214ENST00000545445 ROMO1P60602 79 aa4.52□□□□□ -1.69
LTBR-214ENST00000545445 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
LTBR-214ENST00000545445 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
LTBR-214ENST00000545445 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
LTBR-214ENST00000545445 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
LTBR-214ENST00000545445 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
LTBR-214ENST00000545445 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
LTBR-214ENST00000545445 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
LTBR-214ENST00000545445 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
LTBR-214ENST00000545445 MT1EP04732 61 aa4.35□□□□□ -1.71
LTBR-214ENST00000545445 PP632Q6XCG6 107 aa4.35□□□□□ -1.71
LTBR-214ENST00000545445 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
LTBR-214ENST00000545445 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
LTBR-214ENST00000545445 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
LTBR-214ENST00000545445 MT4P47944 62 aa4.29□□□□□ -1.72
LTBR-214ENST00000545445 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
LTBR-214ENST00000545445 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
LTBR-214ENST00000545445 KRTAP19-3Q7Z4W3 81 aa4.26□□□□□ -1.73
LTBR-214ENST00000545445 MT1GP13640 62 aa4.22□□□□□ -1.73
LTBR-214ENST00000545445 MT1LQ93083 61 aa4.22□□□□□ -1.73
LTBR-214ENST00000545445 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
LTBR-214ENST00000545445 KRTAP19-4Q3LI73 84 aa4.18□□□□□ -1.74
LTBR-214ENST00000545445 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
LTBR-214ENST00000545445 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
LTBR-214ENST00000545445 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
LTBR-214ENST00000545445 MT1MQ8N339 61 aa4.11□□□□□ -1.75
LTBR-214ENST00000545445 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
LTBR-214ENST00000545445 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
LTBR-214ENST00000545445 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
LTBR-214ENST00000545445 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
LTBR-214ENST00000545445 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
LTBR-214ENST00000545445 LCE3CQ5T5A8 94 aa4□□□□□ -1.77
LTBR-214ENST00000545445 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
LTBR-214ENST00000545445 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
LTBR-214ENST00000545445 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
LTBR-214ENST00000545445 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
LTBR-214ENST00000545445 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
LTBR-214ENST00000545445 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
LTBR-214ENST00000545445 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
LTBR-214ENST00000545445 KRTAP5-5Q701N2 237 aaPredicted RBP3.74□□□□□ -1.81
LTBR-214ENST00000545445 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
LTBR-214ENST00000545445 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
LTBR-214ENST00000545445 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
LTBR-214ENST00000545445 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
LTBR-214ENST00000545445 MT1AP04731 61 aa3.6□□□□□ -1.83
LTBR-214ENST00000545445 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
LTBR-214ENST00000545445 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
LTBR-214ENST00000545445 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
LTBR-214ENST00000545445 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
LTBR-214ENST00000545445 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
LTBR-214ENST00000545445 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
LTBR-214ENST00000545445 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
LTBR-214ENST00000545445 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
LTBR-214ENST00000545445 MT3P25713 68 aa3.3□□□□□ -1.88
LTBR-214ENST00000545445 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
LTBR-214ENST00000545445 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
LTBR-214ENST00000545445 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
LTBR-214ENST00000545445 A0A0A0MQY5 61 aa2.98□□□□□ -1.93
LTBR-214ENST00000545445 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
LTBR-214ENST00000545445 H3BS24 57 aa2.96□□□□□ -1.94
LTBR-214ENST00000545445 LCE3DQ9BYE3 92 aa2.96□□□□□ -1.94
LTBR-214ENST00000545445 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
LTBR-214ENST00000545445 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
LTBR-214ENST00000545445 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
LTBR-214ENST00000545445 INE1O15225 51 aa2.78□□□□□ -1.96
LTBR-214ENST00000545445 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
LTBR-214ENST00000545445 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
LTBR-214ENST00000545445 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
LTBR-214ENST00000545445 PHGR1C9JFL3 82 aa2.53□□□□□ -2
LTBR-214ENST00000545445 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
LTBR-214ENST00000545445 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
LTBR-214ENST00000545445 PRM1P04553 51 aa2.3□□□□□ -2.04
LTBR-214ENST00000545445 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
LTBR-214ENST00000545445 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
LTBR-214ENST00000545445 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
LTBR-214ENST00000545445 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 115.6 ms