RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 A0A1B0GU33 70 aa4.86□□□□□ -1.63
RTN3-214ENST00000545432 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
RTN3-214ENST00000545432 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
RTN3-214ENST00000545432 SPATA8Q6RVD6 105 aa4.84□□□□□ -1.63
RTN3-214ENST00000545432 KRTAP12-1P59990 96 aa4.8□□□□□ -1.64
RTN3-214ENST00000545432 COX7CP15954 63 aa4.79□□□□□ -1.64
RTN3-214ENST00000545432 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
RTN3-214ENST00000545432 AHNAKQ09666 5890 aaKnown RBP4.77□□□□□ -1.65
RTN3-214ENST00000545432 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
RTN3-214ENST00000545432 H7BZZ5 65 aa4.74□□□□□ -1.65
RTN3-214ENST00000545432 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
RTN3-214ENST00000545432 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
RTN3-214ENST00000545432 A0A1B0GU69 56 aa4.73□□□□□ -1.65
RTN3-214ENST00000545432 TNP1P09430 55 aa4.67□□□□□ -1.66
RTN3-214ENST00000545432 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
RTN3-214ENST00000545432 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
RTN3-214ENST00000545432 KRTAP5-2Q701N4 177 aa4.65□□□□□ -1.67
RTN3-214ENST00000545432 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
RTN3-214ENST00000545432 A8MU10 97 aa4.63□□□□□ -1.67
RTN3-214ENST00000545432 PRR15LQ9BU68 103 aa4.6□□□□□ -1.67
RTN3-214ENST00000545432 ANAPC13Q9BS18 74 aa4.56□□□□□ -1.68
RTN3-214ENST00000545432 ATP5EP56381 51 aaPredicted RBP4.53□□□□□ -1.68
RTN3-214ENST00000545432 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
RTN3-214ENST00000545432 OBSCNQ5VST9 7968 aa4.45□□□□□ -1.7
RTN3-214ENST00000545432 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
RTN3-214ENST00000545432 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
RTN3-214ENST00000545432 CCDC179H3BU77 68 aa4.42□□□□□ -1.7
RTN3-214ENST00000545432 UQCR11O14957 56 aa4.41□□□□□ -1.7
RTN3-214ENST00000545432 MT1AP04731 61 aa4.41□□□□□ -1.7
RTN3-214ENST00000545432 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
RTN3-214ENST00000545432 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
RTN3-214ENST00000545432 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
RTN3-214ENST00000545432 TMEM258P61165 79 aa4.32□□□□□ -1.72
RTN3-214ENST00000545432 K7ERS5 55 aa4.3□□□□□ -1.72
RTN3-214ENST00000545432 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
RTN3-214ENST00000545432 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
RTN3-214ENST00000545432 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
RTN3-214ENST00000545432 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
RTN3-214ENST00000545432 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
RTN3-214ENST00000545432 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
RTN3-214ENST00000545432 V9GYY9 64 aa4.16□□□□□ -1.74
RTN3-214ENST00000545432 H3BS24 57 aa4.1□□□□□ -1.75
RTN3-214ENST00000545432 PSPHP1O15172 72 aa4.1□□□□□ -1.75
RTN3-214ENST00000545432 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
RTN3-214ENST00000545432 MT3P25713 68 aa4.06□□□□□ -1.76
RTN3-214ENST00000545432 Q1T7F1 81 aa4.06□□□□□ -1.76
RTN3-214ENST00000545432 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
RTN3-214ENST00000545432 A6NED7 52 aa3.99□□□□□ -1.77
RTN3-214ENST00000545432 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
RTN3-214ENST00000545432 ROMO1P60602 79 aa3.92□□□□□ -1.78
RTN3-214ENST00000545432 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
RTN3-214ENST00000545432 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
RTN3-214ENST00000545432 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
RTN3-214ENST00000545432 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
RTN3-214ENST00000545432 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
RTN3-214ENST00000545432 PCP4P48539 62 aa3.47□□□□□ -1.85
RTN3-214ENST00000545432 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
RTN3-214ENST00000545432 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
RTN3-214ENST00000545432 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
RTN3-214ENST00000545432 BRK1Q8WUW1 75 aa3.25□□□□□ -1.89
RTN3-214ENST00000545432 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
RTN3-214ENST00000545432 SVIPQ8NHG7 77 aa3.13□□□□□ -1.91
RTN3-214ENST00000545432 PMAIP1Q13794 54 aa3.05□□□□□ -1.92
RTN3-214ENST00000545432 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
RTN3-214ENST00000545432 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
RTN3-214ENST00000545432 PRAC1Q96KF2 57 aa2.92□□□□□ -1.94
RTN3-214ENST00000545432 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
RTN3-214ENST00000545432 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
RTN3-214ENST00000545432 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
RTN3-214ENST00000545432 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
RTN3-214ENST00000545432 PRO0628Q9UI54 55 aa2.66□□□□□ -1.98
RTN3-214ENST00000545432 LUZP6Q538Z0 58 aa2.61□□□□□ -1.99
RTN3-214ENST00000545432 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
RTN3-214ENST00000545432 KRTAP21-1Q3LI58 79 aa2.48□□□□□ -2.01
RTN3-214ENST00000545432 NDUFAF8A1L188 74 aa2.13□□□□□ -2.07
RTN3-214ENST00000545432 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
RTN3-214ENST00000545432 PRM1P04553 51 aa1.97□□□□□ -2.09
RTN3-214ENST00000545432 INE1O15225 51 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 104.2 ms