RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
ACTN1-206ENST00000544964 SPRR2DP22532 72 aa5□□□□□ -1.61
ACTN1-206ENST00000544964 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
ACTN1-206ENST00000544964 KRTAP23-1A1A580 65 aa4.95□□□□□ -1.62
ACTN1-206ENST00000544964 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
ACTN1-206ENST00000544964 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
ACTN1-206ENST00000544964 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
ACTN1-206ENST00000544964 TNP1P09430 55 aa4.75□□□□□ -1.65
ACTN1-206ENST00000544964 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
ACTN1-206ENST00000544964 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
ACTN1-206ENST00000544964 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
ACTN1-206ENST00000544964 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
ACTN1-206ENST00000544964 KRTAP19-7Q3SYF9 63 aa4.67□□□□□ -1.66
ACTN1-206ENST00000544964 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
ACTN1-206ENST00000544964 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
ACTN1-206ENST00000544964 MT1EP04732 61 aa4.63□□□□□ -1.67
ACTN1-206ENST00000544964 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
ACTN1-206ENST00000544964 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
ACTN1-206ENST00000544964 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
ACTN1-206ENST00000544964 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
ACTN1-206ENST00000544964 LCE1DQ5T752 114 aa4.49□□□□□ -1.69
ACTN1-206ENST00000544964 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
ACTN1-206ENST00000544964 MT1GP13640 62 aa4.45□□□□□ -1.7
ACTN1-206ENST00000544964 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
ACTN1-206ENST00000544964 MT1MQ8N339 61 aa4.41□□□□□ -1.7
ACTN1-206ENST00000544964 MT1LQ93083 61 aa4.41□□□□□ -1.7
ACTN1-206ENST00000544964 MT4P47944 62 aa4.4□□□□□ -1.71
ACTN1-206ENST00000544964 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
ACTN1-206ENST00000544964 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
ACTN1-206ENST00000544964 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
ACTN1-206ENST00000544964 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
ACTN1-206ENST00000544964 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
ACTN1-206ENST00000544964 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
ACTN1-206ENST00000544964 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
ACTN1-206ENST00000544964 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
ACTN1-206ENST00000544964 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
ACTN1-206ENST00000544964 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
ACTN1-206ENST00000544964 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
ACTN1-206ENST00000544964 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
ACTN1-206ENST00000544964 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
ACTN1-206ENST00000544964 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
ACTN1-206ENST00000544964 INE1O15225 51 aa4.08□□□□□ -1.76
ACTN1-206ENST00000544964 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
ACTN1-206ENST00000544964 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
ACTN1-206ENST00000544964 KRTAP12-4P60329 112 aa3.95□□□□□ -1.78
ACTN1-206ENST00000544964 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
ACTN1-206ENST00000544964 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
ACTN1-206ENST00000544964 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
ACTN1-206ENST00000544964 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
ACTN1-206ENST00000544964 MT1AP04731 61 aa3.75□□□□□ -1.81
ACTN1-206ENST00000544964 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
ACTN1-206ENST00000544964 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
ACTN1-206ENST00000544964 MUC5ACP98088 5654 aa3.64□□□□□ -1.83
ACTN1-206ENST00000544964 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
ACTN1-206ENST00000544964 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
ACTN1-206ENST00000544964 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
ACTN1-206ENST00000544964 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
ACTN1-206ENST00000544964 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
ACTN1-206ENST00000544964 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
ACTN1-206ENST00000544964 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
ACTN1-206ENST00000544964 MT3P25713 68 aa3.41□□□□□ -1.86
ACTN1-206ENST00000544964 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
ACTN1-206ENST00000544964 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
ACTN1-206ENST00000544964 LCE3DQ9BYE3 92 aa3.04□□□□□ -1.92
ACTN1-206ENST00000544964 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
ACTN1-206ENST00000544964 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
ACTN1-206ENST00000544964 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
ACTN1-206ENST00000544964 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
ACTN1-206ENST00000544964 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
ACTN1-206ENST00000544964 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
ACTN1-206ENST00000544964 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
ACTN1-206ENST00000544964 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
ACTN1-206ENST00000544964 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
ACTN1-206ENST00000544964 PRM1P04553 51 aa2.39□□□□□ -2.03
ACTN1-206ENST00000544964 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
ACTN1-206ENST00000544964 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
ACTN1-206ENST00000544964 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
ACTN1-206ENST00000544964 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 99.6 ms