RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 MT1EP04732 61 aa4.91□□□□□ -1.62
HCFC2-202ENST00000544223 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.63
HCFC2-202ENST00000544223 MT1LQ93083 61 aa4.84□□□□□ -1.64
HCFC2-202ENST00000544223 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
HCFC2-202ENST00000544223 SPRR2FQ96RM1 72 aa4.81□□□□□ -1.64
HCFC2-202ENST00000544223 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
HCFC2-202ENST00000544223 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
HCFC2-202ENST00000544223 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
HCFC2-202ENST00000544223 LOC100996750A0A140TA64 210 aa4.64□□□□□ -1.67
HCFC2-202ENST00000544223 MT1MQ8N339 61 aa4.62□□□□□ -1.67
HCFC2-202ENST00000544223 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
HCFC2-202ENST00000544223 MT1GP13640 62 aa4.57□□□□□ -1.68
HCFC2-202ENST00000544223 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
HCFC2-202ENST00000544223 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.57□□□□□ -1.68
HCFC2-202ENST00000544223 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
HCFC2-202ENST00000544223 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
HCFC2-202ENST00000544223 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
HCFC2-202ENST00000544223 INE1O15225 51 aa4.49□□□□□ -1.69
HCFC2-202ENST00000544223 SPRR2EP22531 72 aa4.49□□□□□ -1.69
HCFC2-202ENST00000544223 SPRR2BP35325 72 aa4.49□□□□□ -1.69
HCFC2-202ENST00000544223 SPRR2AP35326 72 aa4.49□□□□□ -1.69
HCFC2-202ENST00000544223 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
HCFC2-202ENST00000544223 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
HCFC2-202ENST00000544223 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
HCFC2-202ENST00000544223 SPRR2DP22532 72 aa4.29□□□□□ -1.72
HCFC2-202ENST00000544223 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
HCFC2-202ENST00000544223 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
HCFC2-202ENST00000544223 NEBP20929 6669 aa4.25□□□□□ -1.73
HCFC2-202ENST00000544223 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
HCFC2-202ENST00000544223 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
HCFC2-202ENST00000544223 KRTAP2-1Q9BYU5 128 aa4.24□□□□□ -1.73
HCFC2-202ENST00000544223 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.74
HCFC2-202ENST00000544223 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
HCFC2-202ENST00000544223 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
HCFC2-202ENST00000544223 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
HCFC2-202ENST00000544223 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
HCFC2-202ENST00000544223 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
HCFC2-202ENST00000544223 MT1AP04731 61 aa4.02□□□□□ -1.77
HCFC2-202ENST00000544223 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.77
HCFC2-202ENST00000544223 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
HCFC2-202ENST00000544223 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
HCFC2-202ENST00000544223 MT4P47944 62 aa3.87□□□□□ -1.79
HCFC2-202ENST00000544223 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
HCFC2-202ENST00000544223 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
HCFC2-202ENST00000544223 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
HCFC2-202ENST00000544223 MT3P25713 68 aa3.8□□□□□ -1.8
HCFC2-202ENST00000544223 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
HCFC2-202ENST00000544223 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
HCFC2-202ENST00000544223 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
HCFC2-202ENST00000544223 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
HCFC2-202ENST00000544223 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
HCFC2-202ENST00000544223 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
HCFC2-202ENST00000544223 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
HCFC2-202ENST00000544223 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
HCFC2-202ENST00000544223 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
HCFC2-202ENST00000544223 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
HCFC2-202ENST00000544223 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
HCFC2-202ENST00000544223 PRM1P04553 51 aa3.25□□□□□ -1.89
HCFC2-202ENST00000544223 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
HCFC2-202ENST00000544223 MUC5ACP98088 5654 aa3.18□□□□□ -1.9
HCFC2-202ENST00000544223 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
HCFC2-202ENST00000544223 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
HCFC2-202ENST00000544223 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
HCFC2-202ENST00000544223 KRTAP5-8O75690 187 aa3□□□□□ -1.93
HCFC2-202ENST00000544223 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
HCFC2-202ENST00000544223 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
HCFC2-202ENST00000544223 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
HCFC2-202ENST00000544223 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
HCFC2-202ENST00000544223 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
HCFC2-202ENST00000544223 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
HCFC2-202ENST00000544223 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
HCFC2-202ENST00000544223 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
HCFC2-202ENST00000544223 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
HCFC2-202ENST00000544223 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
HCFC2-202ENST00000544223 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
HCFC2-202ENST00000544223 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
HCFC2-202ENST00000544223 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
HCFC2-202ENST00000544223 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 139.2 ms