RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
LDHC-208ENST00000544105 MT1XP80297 61 aa4.24□□□□□ -1.73
LDHC-208ENST00000544105 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
LDHC-208ENST00000544105 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
LDHC-208ENST00000544105 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
LDHC-208ENST00000544105 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
LDHC-208ENST00000544105 LUZP6Q538Z0 58 aa4□□□□□ -1.77
LDHC-208ENST00000544105 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
LDHC-208ENST00000544105 USH2AO75445 5202 aa3.98□□□□□ -1.77
LDHC-208ENST00000544105 KRTAP5-4Q6L8H1 288 aa3.96□□□□□ -1.78
LDHC-208ENST00000544105 KRTAP12-3P60328 96 aa3.94□□□□□ -1.78
LDHC-208ENST00000544105 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
LDHC-208ENST00000544105 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
LDHC-208ENST00000544105 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
LDHC-208ENST00000544105 FSIP2Q5CZC0 6907 aa3.89□□□□□ -1.79
LDHC-208ENST00000544105 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
LDHC-208ENST00000544105 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
LDHC-208ENST00000544105 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
LDHC-208ENST00000544105 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
LDHC-208ENST00000544105 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
LDHC-208ENST00000544105 MT1EP04732 61 aa3.73□□□□□ -1.81
LDHC-208ENST00000544105 FCGBPQ9Y6R7 5405 aaPredicted RBP3.71□□□□□ -1.81
LDHC-208ENST00000544105 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
LDHC-208ENST00000544105 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
LDHC-208ENST00000544105 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
LDHC-208ENST00000544105 MT1LQ93083 61 aa3.66□□□□□ -1.82
LDHC-208ENST00000544105 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
LDHC-208ENST00000544105 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
LDHC-208ENST00000544105 MACF1Q9UPN3 7388 aaKnown RBP3.61□□□□□ -1.83
LDHC-208ENST00000544105 MT1GP13640 62 aa3.6□□□□□ -1.83
LDHC-208ENST00000544105 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
LDHC-208ENST00000544105 KMT2DO14686 5537 aa3.58□□□□□ -1.84
LDHC-208ENST00000544105 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
LDHC-208ENST00000544105 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
LDHC-208ENST00000544105 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
LDHC-208ENST00000544105 MT1MQ8N339 61 aa3.51□□□□□ -1.85
LDHC-208ENST00000544105 SPRR2EP22531 72 aa3.5□□□□□ -1.85
LDHC-208ENST00000544105 SPRR2BP35325 72 aa3.5□□□□□ -1.85
LDHC-208ENST00000544105 SPRR2AP35326 72 aa3.5□□□□□ -1.85
LDHC-208ENST00000544105 INE1O15225 51 aa3.42□□□□□ -1.86
LDHC-208ENST00000544105 SPRR2DP22532 72 aa3.37□□□□□ -1.87
LDHC-208ENST00000544105 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
LDHC-208ENST00000544105 NEBP20929 6669 aa3.29□□□□□ -1.88
LDHC-208ENST00000544105 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
LDHC-208ENST00000544105 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
LDHC-208ENST00000544105 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
LDHC-208ENST00000544105 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
LDHC-208ENST00000544105 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
LDHC-208ENST00000544105 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
LDHC-208ENST00000544105 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
LDHC-208ENST00000544105 MT1AP04731 61 aa3.13□□□□□ -1.91
LDHC-208ENST00000544105 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
LDHC-208ENST00000544105 KRTAP6-1Q3LI64 71 aa3.06□□□□□ -1.92
LDHC-208ENST00000544105 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
LDHC-208ENST00000544105 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
LDHC-208ENST00000544105 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
LDHC-208ENST00000544105 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
LDHC-208ENST00000544105 MT4P47944 62 aa2.9□□□□□ -1.95
LDHC-208ENST00000544105 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
LDHC-208ENST00000544105 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
LDHC-208ENST00000544105 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
LDHC-208ENST00000544105 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
LDHC-208ENST00000544105 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
LDHC-208ENST00000544105 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
LDHC-208ENST00000544105 HMCN1Q96RW7 5635 aa2.64□□□□□ -1.99
LDHC-208ENST00000544105 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
LDHC-208ENST00000544105 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
LDHC-208ENST00000544105 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
LDHC-208ENST00000544105 PRM1P04553 51 aa2.35□□□□□ -2.03
LDHC-208ENST00000544105 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
LDHC-208ENST00000544105 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
LDHC-208ENST00000544105 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
LDHC-208ENST00000544105 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
LDHC-208ENST00000544105 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
LDHC-208ENST00000544105 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
LDHC-208ENST00000544105 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
LDHC-208ENST00000544105 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 38.1 ms