RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
AFF1-211ENST00000544085 CRCT1Q9UGL9 99 aa3.11□□□□□ -1.91
AFF1-211ENST00000544085 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
AFF1-211ENST00000544085 KRTAP19-5Q3LI72 72 aa3.04□□□□□ -1.92
AFF1-211ENST00000544085 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
AFF1-211ENST00000544085 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
AFF1-211ENST00000544085 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
AFF1-211ENST00000544085 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
AFF1-211ENST00000544085 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
AFF1-211ENST00000544085 KMT2DO14686 5537 aa2.96□□□□□ -1.93
AFF1-211ENST00000544085 LCE4AQ5TA78 99 aa2.95□□□□□ -1.94
AFF1-211ENST00000544085 MT1EP04732 61 aa2.94□□□□□ -1.94
AFF1-211ENST00000544085 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
AFF1-211ENST00000544085 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.94
AFF1-211ENST00000544085 MT1LQ93083 61 aa2.89□□□□□ -1.95
AFF1-211ENST00000544085 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
AFF1-211ENST00000544085 SPRR2FQ96RM1 72 aa2.87□□□□□ -1.95
AFF1-211ENST00000544085 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
AFF1-211ENST00000544085 MT1GP13640 62 aa2.83□□□□□ -1.96
AFF1-211ENST00000544085 KRTAP5-9P26371 169 aa2.83□□□□□ -1.96
AFF1-211ENST00000544085 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
AFF1-211ENST00000544085 LCE5AQ5TCM9 118 aa2.83□□□□□ -1.96
AFF1-211ENST00000544085 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
AFF1-211ENST00000544085 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
AFF1-211ENST00000544085 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
AFF1-211ENST00000544085 LCE1FQ5T754 118 aa2.78□□□□□ -1.97
AFF1-211ENST00000544085 MT1MQ8N339 61 aa2.77□□□□□ -1.97
AFF1-211ENST00000544085 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
AFF1-211ENST00000544085 SPRR2EP22531 72 aa2.74□□□□□ -1.97
AFF1-211ENST00000544085 SPRR2BP35325 72 aa2.74□□□□□ -1.97
AFF1-211ENST00000544085 SPRR2AP35326 72 aa2.74□□□□□ -1.97
AFF1-211ENST00000544085 MUC12Q9UKN1 5478 aa2.7□□□□□ -1.98
AFF1-211ENST00000544085 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
AFF1-211ENST00000544085 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
AFF1-211ENST00000544085 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
AFF1-211ENST00000544085 SPRR2DP22532 72 aa2.64□□□□□ -1.99
AFF1-211ENST00000544085 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
AFF1-211ENST00000544085 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
AFF1-211ENST00000544085 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
AFF1-211ENST00000544085 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
AFF1-211ENST00000544085 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
AFF1-211ENST00000544085 KRTAP20-1Q3LI63 56 aa2.61□□□□□ -1.99
AFF1-211ENST00000544085 MDN1Q9NU22 5596 aa2.57□□□□□ -2
AFF1-211ENST00000544085 NEBP20929 6669 aa2.56□□□□□ -2
AFF1-211ENST00000544085 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
AFF1-211ENST00000544085 MT1AP04731 61 aa2.48□□□□□ -2.01
AFF1-211ENST00000544085 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
AFF1-211ENST00000544085 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
AFF1-211ENST00000544085 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
AFF1-211ENST00000544085 PRM1P04553 51 aa2.39□□□□□ -2.03
AFF1-211ENST00000544085 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
AFF1-211ENST00000544085 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
AFF1-211ENST00000544085 MT3P25713 68 aa2.27□□□□□ -2.05
AFF1-211ENST00000544085 MT4P47944 62 aa2.26□□□□□ -2.05
AFF1-211ENST00000544085 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
AFF1-211ENST00000544085 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
AFF1-211ENST00000544085 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
AFF1-211ENST00000544085 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
AFF1-211ENST00000544085 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
AFF1-211ENST00000544085 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
AFF1-211ENST00000544085 HMCN1Q96RW7 5635 aa2.12□□□□□ -2.07
AFF1-211ENST00000544085 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
AFF1-211ENST00000544085 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
AFF1-211ENST00000544085 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
AFF1-211ENST00000544085 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
AFF1-211ENST00000544085 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
AFF1-211ENST00000544085 LCE1BQ5T7P3 118 aa1.87□□□□□ -2.11
AFF1-211ENST00000544085 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
AFF1-211ENST00000544085 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
AFF1-211ENST00000544085 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
AFF1-211ENST00000544085 MUC5ACP98088 5654 aa1.78□□□□□ -2.12
AFF1-211ENST00000544085 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
AFF1-211ENST00000544085 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
AFF1-211ENST00000544085 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
AFF1-211ENST00000544085 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
AFF1-211ENST00000544085 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
AFF1-211ENST00000544085 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 167.3 ms