RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
CCT4-204ENST00000544079 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
CCT4-204ENST00000544079 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
CCT4-204ENST00000544079 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
CCT4-204ENST00000544079 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
CCT4-204ENST00000544079 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.44
CCT4-204ENST00000544079 MT1LQ93083 61 aa6.08□□□□□ -1.44
CCT4-204ENST00000544079 KRTAP6-3Q3LI67 103 aa5.99□□□□□ -1.45
CCT4-204ENST00000544079 MT1EP04732 61 aa5.98□□□□□ -1.45
CCT4-204ENST00000544079 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
CCT4-204ENST00000544079 KMT2DO14686 5537 aa5.9□□□□□ -1.46
CCT4-204ENST00000544079 NEBP20929 6669 aa5.88□□□□□ -1.47
CCT4-204ENST00000544079 MUC12Q9UKN1 5478 aa5.72□□□□□ -1.49
CCT4-204ENST00000544079 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
CCT4-204ENST00000544079 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
CCT4-204ENST00000544079 MT1GP13640 62 aa5.64□□□□□ -1.51
CCT4-204ENST00000544079 KRTAP5-9P26371 169 aa5.58□□□□□ -1.52
CCT4-204ENST00000544079 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
CCT4-204ENST00000544079 MT1MQ8N339 61 aa5.54□□□□□ -1.52
CCT4-204ENST00000544079 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
CCT4-204ENST00000544079 MT1AP04731 61 aa5.52□□□□□ -1.53
CCT4-204ENST00000544079 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
CCT4-204ENST00000544079 SPRR2EP22531 72 aa5.37□□□□□ -1.55
CCT4-204ENST00000544079 SPRR2BP35325 72 aa5.37□□□□□ -1.55
CCT4-204ENST00000544079 SPRR2AP35326 72 aa5.37□□□□□ -1.55
CCT4-204ENST00000544079 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
CCT4-204ENST00000544079 LCE3BQ5TA77 95 aa5.35□□□□□ -1.55
CCT4-204ENST00000544079 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
CCT4-204ENST00000544079 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
CCT4-204ENST00000544079 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
CCT4-204ENST00000544079 PRM1P04553 51 aa5.29□□□□□ -1.56
CCT4-204ENST00000544079 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
CCT4-204ENST00000544079 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
CCT4-204ENST00000544079 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
CCT4-204ENST00000544079 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
CCT4-204ENST00000544079 SPRR2DP22532 72 aa5.2□□□□□ -1.58
CCT4-204ENST00000544079 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
CCT4-204ENST00000544079 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
CCT4-204ENST00000544079 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
CCT4-204ENST00000544079 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
CCT4-204ENST00000544079 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
CCT4-204ENST00000544079 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
CCT4-204ENST00000544079 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
CCT4-204ENST00000544079 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
CCT4-204ENST00000544079 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
CCT4-204ENST00000544079 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
CCT4-204ENST00000544079 MT4P47944 62 aa4.57□□□□□ -1.68
CCT4-204ENST00000544079 MT3P25713 68 aa4.56□□□□□ -1.68
CCT4-204ENST00000544079 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
CCT4-204ENST00000544079 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
CCT4-204ENST00000544079 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
CCT4-204ENST00000544079 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
CCT4-204ENST00000544079 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.72
CCT4-204ENST00000544079 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
CCT4-204ENST00000544079 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
CCT4-204ENST00000544079 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
CCT4-204ENST00000544079 KRTAP20-2Q3LI61 65 aa4.19□□□□□ -1.74
CCT4-204ENST00000544079 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
CCT4-204ENST00000544079 KRTAP4-2Q9BYR5 136 aa4□□□□□ -1.77
CCT4-204ENST00000544079 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
CCT4-204ENST00000544079 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
CCT4-204ENST00000544079 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
CCT4-204ENST00000544079 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
CCT4-204ENST00000544079 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
CCT4-204ENST00000544079 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
CCT4-204ENST00000544079 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
CCT4-204ENST00000544079 KRTAP21-1Q3LI58 79 aa3.49□□□□□ -1.85
CCT4-204ENST00000544079 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
CCT4-204ENST00000544079 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
CCT4-204ENST00000544079 LCE1FQ5T754 118 aa3.4□□□□□ -1.86
CCT4-204ENST00000544079 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
CCT4-204ENST00000544079 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
CCT4-204ENST00000544079 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CCT4-204ENST00000544079 KRTAP5-11Q6L8G4 156 aa2.88□□□□□ -1.95
CCT4-204ENST00000544079 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
CCT4-204ENST00000544079 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
CCT4-204ENST00000544079 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 64.5 ms