RNA–Protein interactions for RNA: ENST00000544060.1

TDG-208, Transcript of thymine DNA glycosylase, humanhuman

TSL 1 (best)

Gene TDG, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-208ENST00000544060 A8MU10 97 aa6.86□□□□□ -1.31
TDG-208ENST00000544060 TMEM258P61165 79 aa6.86□□□□□ -1.31
TDG-208ENST00000544060 KRTAP19-5Q3LI72 72 aa6.86□□□□□ -1.31
TDG-208ENST00000544060 ATP5EP56381 51 aaPredicted RBP6.85□□□□□ -1.31
TDG-208ENST00000544060 DSTQ03001 7570 aaKnown RBP6.79□□□□□ -1.32
TDG-208ENST00000544060 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
TDG-208ENST00000544060 MT1GP13640 62 aa6.78□□□□□ -1.32
TDG-208ENST00000544060 PP632Q6XCG6 107 aa6.77□□□□□ -1.33
TDG-208ENST00000544060 TNP1P09430 55 aa6.73□□□□□ -1.33
TDG-208ENST00000544060 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
TDG-208ENST00000544060 LCE3AQ5TA76 89 aa6.69□□□□□ -1.34
TDG-208ENST00000544060 MT1MQ8N339 61 aa6.67□□□□□ -1.34
TDG-208ENST00000544060 MT1LQ93083 61 aa6.67□□□□□ -1.34
TDG-208ENST00000544060 LINC01558Q9Y6Z2 57 aa6.64□□□□□ -1.35
TDG-208ENST00000544060 UQCR11O14957 56 aa6.53□□□□□ -1.36
TDG-208ENST00000544060 GPR98Q8WXG9 6306 aa6.5□□□□□ -1.37
TDG-208ENST00000544060 RPS28P62857 69 aaKnown RBP6.5□□□□□ -1.37
TDG-208ENST00000544060 KRTAP4-3Q9BYR4 195 aa6.49□□□□□ -1.37
TDG-208ENST00000544060 MT4P47944 62 aa6.48□□□□□ -1.37
TDG-208ENST00000544060 KRTAP12-3P60328 96 aa6.44□□□□□ -1.38
TDG-208ENST00000544060 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
TDG-208ENST00000544060 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
TDG-208ENST00000544060 Q1T7F1 81 aa6.4□□□□□ -1.38
TDG-208ENST00000544060 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
TDG-208ENST00000544060 KRTAP5-4Q6L8H1 288 aa6.36□□□□□ -1.39
TDG-208ENST00000544060 V9GYY9 64 aa6.35□□□□□ -1.39
TDG-208ENST00000544060 K7ERS5 55 aa6.32□□□□□ -1.4
TDG-208ENST00000544060 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
TDG-208ENST00000544060 PSPHP1O15172 72 aa6.28□□□□□ -1.4
TDG-208ENST00000544060 AHNAK2Q8IVF2 5795 aa6.2□□□□□ -1.42
TDG-208ENST00000544060 SVIPQ8NHG7 77 aa6.1□□□□□ -1.43
TDG-208ENST00000544060 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
TDG-208ENST00000544060 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
TDG-208ENST00000544060 A6NED7 52 aa6.06□□□□□ -1.44
TDG-208ENST00000544060 KRTAP20-2Q3LI61 65 aa6.03□□□□□ -1.44
TDG-208ENST00000544060 KRTAP12-4P60329 112 aa6□□□□□ -1.45
TDG-208ENST00000544060 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
TDG-208ENST00000544060 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
TDG-208ENST00000544060 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
TDG-208ENST00000544060 KRTAP5-7Q6L8G8 165 aa5.85□□□□□ -1.47
TDG-208ENST00000544060 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
TDG-208ENST00000544060 ROMO1P60602 79 aa5.83□□□□□ -1.48
TDG-208ENST00000544060 BRK1Q8WUW1 75 aa5.74□□□□□ -1.49
TDG-208ENST00000544060 MT1AP04731 61 aa5.68□□□□□ -1.5
TDG-208ENST00000544060 PRO0628Q9UI54 55 aa5.66□□□□□ -1.5
TDG-208ENST00000544060 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
TDG-208ENST00000544060 KRTAP5-2Q701N4 177 aa5.56□□□□□ -1.52
TDG-208ENST00000544060 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
TDG-208ENST00000544060 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
TDG-208ENST00000544060 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
TDG-208ENST00000544060 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
TDG-208ENST00000544060 MT3P25713 68 aa5.38□□□□□ -1.55
TDG-208ENST00000544060 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
TDG-208ENST00000544060 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
TDG-208ENST00000544060 PRAC1Q96KF2 57 aa5.15□□□□□ -1.59
TDG-208ENST00000544060 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
TDG-208ENST00000544060 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
TDG-208ENST00000544060 AHNAKQ09666 5890 aaKnown RBP5.09□□□□□ -1.59
TDG-208ENST00000544060 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.59
TDG-208ENST00000544060 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
TDG-208ENST00000544060 KRTAP5-11Q6L8G4 156 aa5.02□□□□□ -1.61
TDG-208ENST00000544060 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
TDG-208ENST00000544060 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.91□□□□□ -1.62
TDG-208ENST00000544060 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
TDG-208ENST00000544060 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
TDG-208ENST00000544060 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
TDG-208ENST00000544060 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
TDG-208ENST00000544060 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
TDG-208ENST00000544060 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
TDG-208ENST00000544060 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
TDG-208ENST00000544060 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
TDG-208ENST00000544060 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
TDG-208ENST00000544060 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
TDG-208ENST00000544060 INE1O15225 51 aa3.49□□□□□ -1.85
TDG-208ENST00000544060 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
TDG-208ENST00000544060 PRM1P04553 51 aa2.98□□□□□ -1.93
TDG-208ENST00000544060 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
TDG-208ENST00000544060 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 53.3 ms