RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
TNFRSF1A-216ENST00000543995 SPRR2DP22532 72 aa5.24□□□□□ -1.57
TNFRSF1A-216ENST00000543995 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
TNFRSF1A-216ENST00000543995 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
TNFRSF1A-216ENST00000543995 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
TNFRSF1A-216ENST00000543995 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
TNFRSF1A-216ENST00000543995 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
TNFRSF1A-216ENST00000543995 PRAC1Q96KF2 57 aa5.17□□□□□ -1.58
TNFRSF1A-216ENST00000543995 MT1LQ93083 61 aa5.16□□□□□ -1.58
TNFRSF1A-216ENST00000543995 MT1GP13640 62 aa5.15□□□□□ -1.58
TNFRSF1A-216ENST00000543995 KRTAP2-3P0C7H8 128 aa5.13□□□□□ -1.59
TNFRSF1A-216ENST00000543995 KRTAP2-4Q9BYR9 128 aa5.13□□□□□ -1.59
TNFRSF1A-216ENST00000543995 SVIPQ8NHG7 77 aa5.07□□□□□ -1.6
TNFRSF1A-216ENST00000543995 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
TNFRSF1A-216ENST00000543995 MT1MQ8N339 61 aa5.06□□□□□ -1.6
TNFRSF1A-216ENST00000543995 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
TNFRSF1A-216ENST00000543995 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
TNFRSF1A-216ENST00000543995 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
TNFRSF1A-216ENST00000543995 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
TNFRSF1A-216ENST00000543995 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
TNFRSF1A-216ENST00000543995 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
TNFRSF1A-216ENST00000543995 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
TNFRSF1A-216ENST00000543995 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
TNFRSF1A-216ENST00000543995 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
TNFRSF1A-216ENST00000543995 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
TNFRSF1A-216ENST00000543995 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
TNFRSF1A-216ENST00000543995 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
TNFRSF1A-216ENST00000543995 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
TNFRSF1A-216ENST00000543995 MT4P47944 62 aa4.56□□□□□ -1.68
TNFRSF1A-216ENST00000543995 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
TNFRSF1A-216ENST00000543995 LCE1DQ5T752 114 aa4.53□□□□□ -1.68
TNFRSF1A-216ENST00000543995 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.69
TNFRSF1A-216ENST00000543995 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
TNFRSF1A-216ENST00000543995 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
TNFRSF1A-216ENST00000543995 MT1AP04731 61 aa4.4□□□□□ -1.71
TNFRSF1A-216ENST00000543995 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
TNFRSF1A-216ENST00000543995 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
TNFRSF1A-216ENST00000543995 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
TNFRSF1A-216ENST00000543995 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
TNFRSF1A-216ENST00000543995 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
TNFRSF1A-216ENST00000543995 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
TNFRSF1A-216ENST00000543995 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
TNFRSF1A-216ENST00000543995 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
TNFRSF1A-216ENST00000543995 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
TNFRSF1A-216ENST00000543995 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
TNFRSF1A-216ENST00000543995 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
TNFRSF1A-216ENST00000543995 MT3P25713 68 aa4.02□□□□□ -1.77
TNFRSF1A-216ENST00000543995 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
TNFRSF1A-216ENST00000543995 KRTAP5-10Q6L8G5 202 aa4□□□□□ -1.77
TNFRSF1A-216ENST00000543995 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
TNFRSF1A-216ENST00000543995 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
TNFRSF1A-216ENST00000543995 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
TNFRSF1A-216ENST00000543995 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
TNFRSF1A-216ENST00000543995 A0A0A0MQY5 61 aa3.65□□□□□ -1.82
TNFRSF1A-216ENST00000543995 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
TNFRSF1A-216ENST00000543995 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.84
TNFRSF1A-216ENST00000543995 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
TNFRSF1A-216ENST00000543995 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
TNFRSF1A-216ENST00000543995 INE1O15225 51 aa3.45□□□□□ -1.86
TNFRSF1A-216ENST00000543995 H3BS24 57 aa3.44□□□□□ -1.86
TNFRSF1A-216ENST00000543995 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
TNFRSF1A-216ENST00000543995 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
TNFRSF1A-216ENST00000543995 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
TNFRSF1A-216ENST00000543995 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
TNFRSF1A-216ENST00000543995 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
TNFRSF1A-216ENST00000543995 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
TNFRSF1A-216ENST00000543995 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
TNFRSF1A-216ENST00000543995 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
TNFRSF1A-216ENST00000543995 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
TNFRSF1A-216ENST00000543995 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
TNFRSF1A-216ENST00000543995 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
TNFRSF1A-216ENST00000543995 PRM1P04553 51 aa2.83□□□□□ -1.96
TNFRSF1A-216ENST00000543995 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
TNFRSF1A-216ENST00000543995 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
TNFRSF1A-216ENST00000543995 PHGR1C9JFL3 82 aa2.57□□□□□ -2
TNFRSF1A-216ENST00000543995 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
TNFRSF1A-216ENST00000543995 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
TNFRSF1A-216ENST00000543995 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 136 ms